@inbook{e1e34493fa2b471f8c53ea2fe5c5c31c,
title = "Sloppiness and the Geometry of Parameter Space",
abstract = "When modeling complex biological systems, exploring parameter space is critical, because parameter values are typically poorly known a priori. This exploration can be challenging, because parameter space often has high dimension and complex structure. Recent work, however, has revealed universal structure in parameter space of models for nonlinear systems. In particular, models are often sloppy, with strong parameter correlations and an exponential range of parameter sensitivities. Here we review the evidence for universal sloppiness and its implications for parameter fitting, model prediction, and experimental design. In principle, one can transform parameters to alleviate sloppiness, but a parameterization-independent information geometry perspective reveals deeper universal structure. We thus also review the recent insights offered by information geometry, particularly in regard to sloppiness and numerical methods.",
keywords = "Bayesian ensembles, Cost functions, Experimental design, Hessian, Information geometry, Sloppiness",
author = "Mannakee, {Brian K.} and Ragsdale, {Aaron P.} and Transtrum, {Mark K.} and Gutenkunst, {Ryan N.}",
note = "Funding Information: Acknowledgments B.M. was supported by an ARCS Foundation Fellowship. A.R. was supported by NSF IGERT grant DGE-0654435. R.G. was supported by NSF grant DEB-1146074. We thank Alec Coffman for helpful discussions. R.G. and M.T. particularly thank Jim Sethna for his outstanding support and mentorship. Publisher Copyright: {\textcopyright} 2016, Springer International Publishing Switzerland.",
year = "2016",
doi = "10.1007/978-3-319-21296-8_11",
language = "English (US)",
series = "Studies in Mechanobiology, Tissue Engineering and Biomaterials",
publisher = "Springer",
pages = "271--299",
booktitle = "Studies in Mechanobiology, Tissue Engineering and Biomaterials",
}