Skin in the game: A review of single-cell and spatial transcriptomics in dermatological research

  • Samuel Schepps
  • , Jonathan Xu
  • , Henry Yang
  • , Jenna Mandel
  • , Jaanvi Mehta
  • , Julianna Tolotta
  • , Nicole Baker
  • , Volkan Tekmen
  • , Neda Nikbakht
  • , Paolo Fortina
  • , Ignacia Fuentes
  • , Bonnie Lafleur
  • , Raymond J. Cho
  • , Andrew P. South

Research output: Contribution to journalReview articlepeer-review

5 Scopus citations

Abstract

Single-cell RNA sequencing (scRNA-seq) and spatial transcriptomics (ST) are two emerging research technologies that uniquely characterize gene expression microenvironments on a cellular or subcellular level. The skin, a clinically accessible tissue composed of diverse, essential cell populations, serves as an ideal target for these high-resolution investigative approaches. Using these tools, researchers are assembling a compendium of data and discoveries in healthy skin as well as a range of dermatologic pathophysiologies, including atopic dermatitis, psoriasis, and cutaneous malignancies. The ongoing advancement of single-cell approaches, coupled with anticipated decreases in cost with increased adoption, will reshape dermatologic research, profoundly influencing disease characterization, prognosis, and ultimately clinical practice.

Original languageEnglish (US)
Pages (from-to)1880-1891
Number of pages12
JournalClinical Chemistry and Laboratory Medicine
Volume62
Issue number10
DOIs
StatePublished - Sep 2024
Externally publishedYes

Keywords

  • gene expression
  • single cell transcriptomics
  • skin
  • spatial transcriptomics

ASJC Scopus subject areas

  • Clinical Biochemistry
  • Biochemistry, medical

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