Random Forest and K-Means Clustering Algorithms to Classify of 18F-Florbetapir Brain PET

Alexa Bootherstone, Louis Lee, Liam Cristant, Phillip H. Kuo, Carlos Uribe, Sandra E. Black, Katherine Zukotynski, Vincent Gaudet

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Abstract

This paper explores and compares the use of two common machine learning (ML) algorithms, random forests (RF) and k-means clustering (KMC), for classifying 18F-florbetapir brain PET as positive or negative for amyloid deposition. The pilot dataset consists of 65 18F-Florbetapir PET and corresponding MRI studies taken from the Alzheimer's Disease Neuroimaging Initiative (ADNI), in patients with mild cognitive impairment (MCI). Each PET scan was read as positive or negative for amyloid deposition by two physicians dual board certified in nuclear medicine and radiology with final interpretation based on consensus. This clinical interpretation of the PET scans served as the gold standard. Using an image processing pipeline, standardized uptake value ratios (SUVR) were computed in 57 brain regions, with normalization to the cerebellar gray matter. The RF algorithm had a slightly higher classification accuracy (91±6%) compared with the KMC algorithm (81±3%), using 4-fold cross-validation. However, the KMC algorithm had lower computational cost and may highlight equivocal cases on clinical interpretation. Further investigation is ongoing.

Original languageEnglish (US)
Title of host publicationProceedings - 2024 IEEE 54th International Symposium on Multiple-Valued Logic, ISMVL 2024
PublisherIEEE Computer Society
Pages167-171
Number of pages5
ISBN (Electronic)9798350343083
DOIs
StatePublished - 2024
Event54th IEEE International Symposium on Multiple-Valued Logic, ISMVL 2024 - Brno, Czech Republic
Duration: May 28 2024May 30 2024

Publication series

NameProceedings of The International Symposium on Multiple-Valued Logic
ISSN (Print)0195-623X

Conference

Conference54th IEEE International Symposium on Multiple-Valued Logic, ISMVL 2024
Country/TerritoryCzech Republic
CityBrno
Period5/28/245/30/24

Keywords

  • K-means clustering
  • amyloid
  • dementia
  • machine learning
  • mild cognitive impairment
  • positron emission tomography
  • random forest

ASJC Scopus subject areas

  • General Computer Science
  • General Mathematics

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