New Role for Radical SAM Enzymes in the Biosynthesis of Thio(seleno)oxazole RiPP Natural Products

  • Julia K. Lewis
  • , Andrew S. Jochimsen
  • , Sarah J. Lefave
  • , Anthony P. Young
  • , William M. Kincannon
  • , Andrew G. Roberts
  • , Matthew T. Kieber-Emmons
  • , Vahe Bandarian

Research output: Contribution to journalArticlepeer-review

20 Scopus citations

Abstract

Ribosomally synthesized post-translationally modified peptides (RiPPs) are ubiquitous and represent a structurally diverse class of natural products. The ribosomally encoded precursor polypeptides are often extensively modified post-translationally by enzymes that are encoded by coclustered genes. Radical S-adenosyl-l-methionine (SAM) enzymes catalyze numerous chemically challenging transformations. In RiPP biosynthetic pathways, these transformations include the formation of C-H, C-C, C-S, and C-O linkages. In this paper, we show that the Geobacter lovleyi sbtM gene encodes a radical SAM protein, SbtM, which catalyzes the cyclization of a Cys/SeCys residue in a minimal peptide substrate. Biochemical studies of this transformation support a mechanism involving H-atom abstraction at the C-3 of the substrate Cys to initiate the chemistry. Several possible cyclization products were considered. The collective biochemical, spectroscopic, mass spectral, and computational observations point to a thiooxazole as the product of the SbtM-catalyzed modification. To our knowledge, this is the first example of a radical SAM enzyme that catalyzes a transformation involving a SeCys-containing peptide and represents a new paradigm for formation of oxazole-containing RiPP natural products.

Original languageEnglish (US)
Pages (from-to)3347-3361
Number of pages15
JournalBiochemistry
Volume60
Issue number45
DOIs
StatePublished - Nov 16 2021

ASJC Scopus subject areas

  • Biochemistry

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