TY - JOUR
T1 - MIFlowCyt
T2 - The minimum information about a flow cytometry experiment
AU - Lee, Jamie A.
AU - Spidlen, Josef
AU - Boyce, Keith
AU - Cai, Jennifer
AU - Crosbie, Nicholas
AU - Dalphin, Mark
AU - Furlong, Jeff
AU - Gasparetto, Maura
AU - Goldberg, Michael
AU - Goralczyk, Elizabeth M.
AU - Hyun, Bill
AU - Jansen, Kirstin
AU - Kollmann, Tobias
AU - Kong, Megan
AU - Leif, Robert
AU - McWeeney, Shannon
AU - Moloshok, Thomas D.
AU - Moore, Wayne
AU - Nolan, Garry
AU - Nolan, John
AU - Nikolich-Zugich, Janko
AU - Parrish, David
AU - Purcell, Barclay
AU - Qian, Yu
AU - Selvaraj, Biruntha
AU - Smith, Clayton
AU - Tchuvatkina, Olga
AU - Wertheimer, Anne
AU - Wilkinson, Peter
AU - Wilson, Christopher
AU - Wood, James
AU - Zigon, Robert
AU - Scheuermann, Richard H.
AU - Brinkman, Ryan R.
PY - 2008/10
Y1 - 2008/10
N2 - A fundamental tenet of scientific research is that published results are open to independent validation and refutation. Minimum data standards aid data providers, users, and publishers by providing a specification of what is required to unambiguously interpret experimental findings. Here, we present the Minimum Information about a Flow Cytometry Experiment (MIFlowCyt) standard, stating the minimum information required to report flow cytometry (FCM) experiments. We brought together a cross-disciplinary international collaborative group of bioinformaticians, computational statisticians, software developers, instrument manufacturers, and clinical and basic research scientists to develop the standard. The standard was subsequently vetted by the International Society for Advancement of Cytometry (ISAC) Data Standards Task Force, Standards Committee, membership, and Council. The MIFlowCyt standard includes recommendations about descriptions of the specimens and reagents included in the FCM experiment, the configuration of the instrument used to perform the assays, and the data processing approaches used to interpret the primary output data. MIFlowCyt has been adopted as a standard by ISAC, representing the FCM scientific community including scientists as well as software and hardware manufacturers. Adoption of MIFlowCyt by the scientific and publishing communities will facilitate third-party understanding and reuse of FCM data.
AB - A fundamental tenet of scientific research is that published results are open to independent validation and refutation. Minimum data standards aid data providers, users, and publishers by providing a specification of what is required to unambiguously interpret experimental findings. Here, we present the Minimum Information about a Flow Cytometry Experiment (MIFlowCyt) standard, stating the minimum information required to report flow cytometry (FCM) experiments. We brought together a cross-disciplinary international collaborative group of bioinformaticians, computational statisticians, software developers, instrument manufacturers, and clinical and basic research scientists to develop the standard. The standard was subsequently vetted by the International Society for Advancement of Cytometry (ISAC) Data Standards Task Force, Standards Committee, membership, and Council. The MIFlowCyt standard includes recommendations about descriptions of the specimens and reagents included in the FCM experiment, the configuration of the instrument used to perform the assays, and the data processing approaches used to interpret the primary output data. MIFlowCyt has been adopted as a standard by ISAC, representing the FCM scientific community including scientists as well as software and hardware manufacturers. Adoption of MIFlowCyt by the scientific and publishing communities will facilitate third-party understanding and reuse of FCM data.
KW - Fluorescence-activated cell sorting
KW - Immunology
KW - Knowledge representation
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U2 - 10.1002/cyto.a.20623
DO - 10.1002/cyto.a.20623
M3 - Article
C2 - 18752282
AN - SCOPUS:53049110682
SN - 1552-4922
VL - 73
SP - 926
EP - 930
JO - Cytometry Part A
JF - Cytometry Part A
IS - 10
ER -