TY - JOUR
T1 - Measuring 1HN temperature coefficients in invisible protein states by relaxation dispersion NMR spectroscopy
AU - Bouvignies, Guillaume
AU - Vallurupalli, Pramodh
AU - Cordes, Matthew H.J.
AU - Hansen, D. Flemming
AU - Kay, Lewis E.
N1 - Funding Information:
Acknowledgments G.B. acknowledges the European Molecular Biology Organization and the Canadian Institutes of Health Research (CHIR) for post-doctoral fellowships. D.F.H was supported by a postdoctoral fellowship from the CIHR. This work was supported by grants from the CIHR and the Natural Sciences and Engineering Research Council of Canada (LEK) and the NIH (GM066806 to M.H.J.C.). L.E.K. holds a Canada Research Chair in Biochemistry.
PY - 2011/5
Y1 - 2011/5
N2 - A method based on the Carr-Purcell-Meiboom- Gill relaxation dispersion experiment is presented for measuring the temperature coefficients of amide proton chemical shifts of low populated 'invisible' protein states that exchange with a 'visible' ground state on the millisecond time-scale. The utility of the approach is demonstrated with an application to an I58D mutant of the Pfl6 Cro protein that undergoes exchange between the native, folded state and a cold denatured, unfolded conformational ensemble that is populated at a level of 6% at 2.5°C. A wide distribution of amide temperature coefficients is measured for the unfolded state. The distribution is centered about -5.6 ppb/K, consistent with an absence of intra-molecular hydrogen bonds, on average. However, the large range of values (standard deviation of 2.1 ppb/K) strongly supports the notion that the unfolded state of the protein is not a true random coil polypeptide chain.
AB - A method based on the Carr-Purcell-Meiboom- Gill relaxation dispersion experiment is presented for measuring the temperature coefficients of amide proton chemical shifts of low populated 'invisible' protein states that exchange with a 'visible' ground state on the millisecond time-scale. The utility of the approach is demonstrated with an application to an I58D mutant of the Pfl6 Cro protein that undergoes exchange between the native, folded state and a cold denatured, unfolded conformational ensemble that is populated at a level of 6% at 2.5°C. A wide distribution of amide temperature coefficients is measured for the unfolded state. The distribution is centered about -5.6 ppb/K, consistent with an absence of intra-molecular hydrogen bonds, on average. However, the large range of values (standard deviation of 2.1 ppb/K) strongly supports the notion that the unfolded state of the protein is not a true random coil polypeptide chain.
KW - Amide protons
KW - CPMG relaxation dispersion
KW - Cold denaturation
KW - Temperature coefficients
UR - http://www.scopus.com/inward/record.url?scp=80051665849&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=80051665849&partnerID=8YFLogxK
U2 - 10.1007/s10858-011-9498-0
DO - 10.1007/s10858-011-9498-0
M3 - Article
C2 - 21424227
AN - SCOPUS:80051665849
VL - 50
SP - 13
EP - 18
JO - Journal of Biomolecular NMR
JF - Journal of Biomolecular NMR
SN - 0925-2738
IS - 1
ER -