Abstract
H-bonding interactions of the cytosine-modeling compounds 4-aminopyridine and 4-aminopyrimidine with water are investigated with the use of a combined experimental matrix-isolation FT-IR and theoretical ab-initio method. Both bases appear exclusively as the amino tautomers in low-temperature Ar matrices, in accordance with large ab-initio predicted energy differences with the rare imino forms. The most stable complex of water with 4-aminopyridine is the H-bonded N1⋯HO-H structure, but the energy difference with the alternative N-H⋯OH2 complex is calculated to be only 6.7 kJ/mol. Both complexes are observed in the Ar matrix. In the case of 4-aminopyrimidine, the closed N-H⋯O-H⋯N3 structure containing two H-bonds is found to be significantly more stable than the singly H-bonded structures N1⋯HO-H and N-H⋯OH2 by 8.0 and 10.2 kJ/mol, respectively. The previously suggested relation between the scaling factor for the theoretically-calculated vbOH mode of the H-bonded water and the proton affinity value of the proton-acceptor site in the base is developed further.
| Original language | English (US) |
|---|---|
| Pages (from-to) | 6387-6400 |
| Number of pages | 14 |
| Journal | Journal of physical chemistry |
| Volume | 99 |
| Issue number | 17 |
| DOIs | |
| State | Published - 1995 |
ASJC Scopus subject areas
- General Engineering
- Physical and Theoretical Chemistry
Fingerprint
Dive into the research topics of 'Matrix-isolation FT-IR studies and ab-initio calculations of hydrogen-bonded complexes of molecules modeling cytosine or isocytosine tautomers. 2. 4-Aminopyridine and 4-aminopyrimidine complexes with H2O in Ar matrices'. Together they form a unique fingerprint.Cite this
- APA
- Standard
- Harvard
- Vancouver
- Author
- BIBTEX
- RIS