Genetic and physical mapping of the treacher collins syndrome locus with respect to loci in the chromosome 5q3 region

Ethylin Wang Jabs; Xiang Li; Michael Lovett; Larry H. Yamaoka; Eugene Taylor; Marcy C. Speer; Cathleen Coss; Ronald Cadle; Bryan Hall; Karen Brown; Kenneth K. Kidd; Gregory Dolganov; Mihael H. Polymeropoulos; Deborah A. Meyers

doi:10.1006/geno.1993.1420

Genetic and physical mapping of the treacher collins syndrome locus with respect to loci in the chromosome 5q3 region

Ethylin Wang Jabs, Xiang Li, Michael Lovett, Larry H. Yamaoka, Eugene Taylor, Marcy C. Speer, Cathleen Coss, Ronald Cadle, Bryan Hall, Karen Brown, Kenneth K. Kidd, Gregory Dolganov, Mihael H. Polymeropoulos, Deborah A. Meyers

Research output: Contribution to journal › Article › peer-review

34 Scopus citations

Abstract

Treacher Collins syndrome is an autosomal dominant, craniofacial developmental disorder, and its locus (TCOF1) has been mapped to chromosome 5q3. To refine the location of the gene within this region, linkage analysis was performed among the TCOF1 locus and 12 loci (IL9, FGFA, GRL, D5S207, D5S210, D5S376, CSF1R, SPARC, D5S119, D5S209, D5S527, FGFR4) in 13 Treacher Collins syndrome families. The highest maximum lod score was obtained between loci TCOF1 and D5S210 (Z = 10.52; θ = 0.02 ± 0.07). The best order, IL9-GRL-D5S207/D5S210-CSF1R-SPARC-D5S119, and genetic distances among these loci were determined in the 40 CEPH families by multipoint linkage analysis. YAC clones were used to establish the order of loci, centromere-5′GRL3′-D5S207-D5S210-D5S376-CSF1R-SPARC-D5S119-t elomere. By combining known physical mapping data with ours, the order of chromosome 5q3 markers is centromere-IL9-FGFA-5′GRL3′-D5S207-D5S210-D5S376-CSF1R-SPARC -D5S119-D5S209-FGFR4-telomere. Based on this order, haplotype analysis suggests that the TCOF1 locus resides distal of CSF1R and proximal to SPARC within a region less than 1 Mb in size.

Original language	English (US)
Pages (from-to)	7-13
Number of pages	7
Journal	Genomics
Volume	18
Issue number	1
DOIs	https://doi.org/10.1006/geno.1993.1420
State	Published - Oct 1993
Externally published	Yes

ASJC Scopus subject areas

Genetics

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Jabs, E. W., Li, X., Lovett, M., Yamaoka, L. H., Taylor, E., Speer, M. C., Coss, C., Cadle, R., Hall, B., Brown, K., Kidd, K. K., Dolganov, G., Polymeropoulos, M. H., & Meyers, D. A. (1993). Genetic and physical mapping of the treacher collins syndrome locus with respect to loci in the chromosome 5q3 region. Genomics, 18(1), 7-13. https://doi.org/10.1006/geno.1993.1420

@article{5a118b8873a74dde89d4e56f00f17720,

title = "Genetic and physical mapping of the treacher collins syndrome locus with respect to loci in the chromosome 5q3 region",

abstract = "Treacher Collins syndrome is an autosomal dominant, craniofacial developmental disorder, and its locus (TCOF1) has been mapped to chromosome 5q3. To refine the location of the gene within this region, linkage analysis was performed among the TCOF1 locus and 12 loci (IL9, FGFA, GRL, D5S207, D5S210, D5S376, CSF1R, SPARC, D5S119, D5S209, D5S527, FGFR4) in 13 Treacher Collins syndrome families. The highest maximum lod score was obtained between loci TCOF1 and D5S210 (Z = 10.52; θ = 0.02 ± 0.07). The best order, IL9-GRL-D5S207/D5S210-CSF1R-SPARC-D5S119, and genetic distances among these loci were determined in the 40 CEPH families by multipoint linkage analysis. YAC clones were used to establish the order of loci, centromere-5′GRL3′-D5S207-D5S210-D5S376-CSF1R-SPARC-D5S119-t elomere. By combining known physical mapping data with ours, the order of chromosome 5q3 markers is centromere-IL9-FGFA-5′GRL3′-D5S207-D5S210-D5S376-CSF1R-SPARC -D5S119-D5S209-FGFR4-telomere. Based on this order, haplotype analysis suggests that the TCOF1 locus resides distal of CSF1R and proximal to SPARC within a region less than 1 Mb in size.",

author = "Jabs, {Ethylin Wang} and Xiang Li and Michael Lovett and Yamaoka, {Larry H.} and Eugene Taylor and Speer, {Marcy C.} and Cathleen Coss and Ronald Cadle and Bryan Hall and Karen Brown and Kidd, {Kenneth K.} and Gregory Dolganov and Polymeropoulos, {Mihael H.} and Meyers, {Deborah A.}",

year = "1993",

month = oct,

doi = "10.1006/geno.1993.1420",

language = "English (US)",

volume = "18",

pages = "7--13",

journal = "Genomics",

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T1 - Genetic and physical mapping of the treacher collins syndrome locus with respect to loci in the chromosome 5q3 region

AU - Jabs, Ethylin Wang

AU - Li, Xiang

AU - Lovett, Michael

AU - Yamaoka, Larry H.

AU - Taylor, Eugene

AU - Speer, Marcy C.

AU - Coss, Cathleen

AU - Cadle, Ronald

AU - Hall, Bryan

AU - Brown, Karen

AU - Kidd, Kenneth K.

AU - Dolganov, Gregory

AU - Polymeropoulos, Mihael H.

AU - Meyers, Deborah A.

PY - 1993/10

Y1 - 1993/10

N2 - Treacher Collins syndrome is an autosomal dominant, craniofacial developmental disorder, and its locus (TCOF1) has been mapped to chromosome 5q3. To refine the location of the gene within this region, linkage analysis was performed among the TCOF1 locus and 12 loci (IL9, FGFA, GRL, D5S207, D5S210, D5S376, CSF1R, SPARC, D5S119, D5S209, D5S527, FGFR4) in 13 Treacher Collins syndrome families. The highest maximum lod score was obtained between loci TCOF1 and D5S210 (Z = 10.52; θ = 0.02 ± 0.07). The best order, IL9-GRL-D5S207/D5S210-CSF1R-SPARC-D5S119, and genetic distances among these loci were determined in the 40 CEPH families by multipoint linkage analysis. YAC clones were used to establish the order of loci, centromere-5′GRL3′-D5S207-D5S210-D5S376-CSF1R-SPARC-D5S119-t elomere. By combining known physical mapping data with ours, the order of chromosome 5q3 markers is centromere-IL9-FGFA-5′GRL3′-D5S207-D5S210-D5S376-CSF1R-SPARC -D5S119-D5S209-FGFR4-telomere. Based on this order, haplotype analysis suggests that the TCOF1 locus resides distal of CSF1R and proximal to SPARC within a region less than 1 Mb in size.

AB - Treacher Collins syndrome is an autosomal dominant, craniofacial developmental disorder, and its locus (TCOF1) has been mapped to chromosome 5q3. To refine the location of the gene within this region, linkage analysis was performed among the TCOF1 locus and 12 loci (IL9, FGFA, GRL, D5S207, D5S210, D5S376, CSF1R, SPARC, D5S119, D5S209, D5S527, FGFR4) in 13 Treacher Collins syndrome families. The highest maximum lod score was obtained between loci TCOF1 and D5S210 (Z = 10.52; θ = 0.02 ± 0.07). The best order, IL9-GRL-D5S207/D5S210-CSF1R-SPARC-D5S119, and genetic distances among these loci were determined in the 40 CEPH families by multipoint linkage analysis. YAC clones were used to establish the order of loci, centromere-5′GRL3′-D5S207-D5S210-D5S376-CSF1R-SPARC-D5S119-t elomere. By combining known physical mapping data with ours, the order of chromosome 5q3 markers is centromere-IL9-FGFA-5′GRL3′-D5S207-D5S210-D5S376-CSF1R-SPARC -D5S119-D5S209-FGFR4-telomere. Based on this order, haplotype analysis suggests that the TCOF1 locus resides distal of CSF1R and proximal to SPARC within a region less than 1 Mb in size.

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IS - 1

ER -

Genetic and physical mapping of the treacher collins syndrome locus with respect to loci in the chromosome 5q3 region

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