Future-proofing your microbiology resource announcements genome assembly for reproducibility and clarity

David A. Baltrus; Christina A. Cuomo; John J. Dennehy; Julie C. Dunning Hotopp; Julia A. Maresca; Irene L.G. Newton; David A. Rasko; Antonis Rokas; Simon Roux; Jason E. Stajich

doi:10.1128/MRA.00954-19

Future-proofing your microbiology resource announcements genome assembly for reproducibility and clarity

David A. Baltrus, Christina A. Cuomo, John J. Dennehy, Julie C. Dunning Hotopp, Julia A. Maresca, Irene L.G. Newton, David A. Rasko, Antonis Rokas, Simon Roux, Jason E. Stajich

Research output: Contribution to journal › Review article › peer-review

2 Scopus citations

Abstract

Descriptions of resources, like the genome assemblies reported in Microbiology Resource Announcements, are often frozen at their time of publication, yet they will need to be interpreted in the midst of continually evolving technologies. It is therefore important to ensure that researchers accessing published resources have access to all of the information required to repeat, interpret, and extend these original analyses. Here, we provide a set of suggestions to help make certain that published resources remain useful and repeatable for the foreseeable future.

Original language	English (US)
Article number	e00954-19
Journal	Microbiology Resource Announcements
Volume	8
Issue number	36
DOIs	https://doi.org/10.1128/MRA.00954-19
State	Published - Sep 5 2019

ASJC Scopus subject areas

Molecular Biology
Immunology and Microbiology (miscellaneous)
Genetics

Access to Document

10.1128/MRA.00954-19

Cite this

@article{6272ea73ffc6478dad0521d3a077d04f,

title = "Future-proofing your microbiology resource announcements genome assembly for reproducibility and clarity",

abstract = "Descriptions of resources, like the genome assemblies reported in Microbiology Resource Announcements, are often frozen at their time of publication, yet they will need to be interpreted in the midst of continually evolving technologies. It is therefore important to ensure that researchers accessing published resources have access to all of the information required to repeat, interpret, and extend these original analyses. Here, we provide a set of suggestions to help make certain that published resources remain useful and repeatable for the foreseeable future.",

author = "Baltrus, {David A.} and Cuomo, {Christina A.} and Dennehy, {John J.} and {Dunning Hotopp}, {Julie C.} and Maresca, {Julia A.} and Newton, {Irene L.G.} and Rasko, {David A.} and Antonis Rokas and Simon Roux and Stajich, {Jason E.}",

note = "Publisher Copyright: Copyright {\textcopyright} 2019 Baltrus et al.",

year = "2019",

month = sep,

day = "5",

doi = "10.1128/MRA.00954-19",

language = "English (US)",

volume = "8",

journal = "Microbiology Resource Announcements",

issn = "2169-8287",

publisher = "American Society for Microbiology",

number = "36",

}

TY - JOUR

T1 - Future-proofing your microbiology resource announcements genome assembly for reproducibility and clarity

AU - Baltrus, David A.

AU - Cuomo, Christina A.

AU - Dennehy, John J.

AU - Dunning Hotopp, Julie C.

AU - Maresca, Julia A.

AU - Newton, Irene L.G.

AU - Rasko, David A.

AU - Rokas, Antonis

AU - Roux, Simon

AU - Stajich, Jason E.

PY - 2019/9/5

Y1 - 2019/9/5

N2 - Descriptions of resources, like the genome assemblies reported in Microbiology Resource Announcements, are often frozen at their time of publication, yet they will need to be interpreted in the midst of continually evolving technologies. It is therefore important to ensure that researchers accessing published resources have access to all of the information required to repeat, interpret, and extend these original analyses. Here, we provide a set of suggestions to help make certain that published resources remain useful and repeatable for the foreseeable future.

AB - Descriptions of resources, like the genome assemblies reported in Microbiology Resource Announcements, are often frozen at their time of publication, yet they will need to be interpreted in the midst of continually evolving technologies. It is therefore important to ensure that researchers accessing published resources have access to all of the information required to repeat, interpret, and extend these original analyses. Here, we provide a set of suggestions to help make certain that published resources remain useful and repeatable for the foreseeable future.

UR - http://www.scopus.com/inward/record.url?scp=85071850135&partnerID=8YFLogxK

UR - http://www.scopus.com/inward/citedby.url?scp=85071850135&partnerID=8YFLogxK

U2 - 10.1128/MRA.00954-19

DO - 10.1128/MRA.00954-19

M3 - Review article

AN - SCOPUS:85071850135

SN - 2169-8287

VL - 8

JO - Microbiology Resource Announcements

JF - Microbiology Resource Announcements

IS - 36

M1 - e00954-19

ER -

Future-proofing your microbiology resource announcements genome assembly for reproducibility and clarity

Abstract

ASJC Scopus subject areas

Access to Document

Other files and links

Fingerprint

Cite this