Formalin-fixed paraffin-embedded tissues for microbiome analysis in rainbow trout (Oncorhynchus mykiss)

Roberto Cruz-Flores, Mónica Hernández Rodríguez, Jesús Salvador Olivier Guirado Flores, Arun K. Dhar

Research output: Contribution to journalArticlepeer-review

1 Scopus citations

Abstract

The gut microbiomes of rainbow trout (Oncorhynchus mykiss) reared at 16° and 22 °C were determined using formalin-fixed paraffin-embedded tissues (FFPE) and compared to fresh frozen tissue. The data revealed microbiomes could be successfully determined using FFPE tissue opening a new horizon in studying intestinal microbiota using archived histological samples.

Original languageEnglish (US)
Article number106389
JournalJournal of Microbiological Methods
Volume192
DOIs
StatePublished - Jan 2022

Keywords

  • Formalin-fixed paraffin-embedded
  • Microbiome
  • Rainbow trout
  • Temperature

ASJC Scopus subject areas

  • Microbiology
  • Molecular Biology
  • Microbiology (medical)

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