TY - GEN
T1 - Evaluation of illumination systems for wide-field hyperspectral imaging in biomedical applications
AU - Sawyer, Travis W.
AU - Luthman, A. Siri
AU - Bohndiek, Sarah E.
N1 - Funding Information:
We would like to thank Dr. James Joseph and Dr. Jonghee Yoon for manuscript comments and Dr. John Koshel of the University of Arizona for assistance with the optical design and analysis software, as well as theoretical support provided in the Illumination Engineering course. TWS is funded by the Winston Churchill Foundation of the United States. ASL is funded by the EPSRC, the George and Lillian Schiff Foundation and the Foundation Blanceor. SEB is funded by CRUK (C14303/A17197, C47594/A16267 and C47594/A21102) and the European Union's Seventh Framework Programme (FP7/2007-2013) under grant agreement number FP7-PEOPLE-2013-CIG-630729
Publisher Copyright:
© 2017 SPIE.
PY - 2017
Y1 - 2017
N2 - Hyperspectral imaging (HSI) systems collect both morphological and chemical characteristics from a sample by simultaneously acquiring spatial and spectral information. HSI has potential to advance cancer diagnostics by characterizing reectance and uorescence properties of a tissue, as well as extracting microstructural in- formation, all of which are altered through the development of a tumor. Illumination uniformity is a critical pre-condition for extracting quantitative data from an HSI system. Spatial, angular, or spectral non-uniformity can cause glare, specular reection and unwanted shading, which negatively impact statistical analysis tech- niques used to extract abundance of different chemical species. This is further exacerbated when imaging three-dimensional structures, such as tumors, whose appearance can cast shadows and form other occlusions. Furthermore, as HSI can be used simultaneously for white light and uorescence imaging, a exible system, which multiplexes narrowband and broadband illumination is necessary to fully utilize the capabilities of a biomedical HSI system. To address these challenges, we modeled illumination systems frequently used in wide-field biological imaging with the software LightTools and FRED. Each system is characterized for spectral, spatial, and angular uniformity, as well as total effciency. While all three systems provide high spatial and spectral uniformity, the highest angular uniformity is achieved using a diffiuse scattering dome, yielding a contrast of 0.503 and average deviation of 0.303 with a 3.91% model error. Nonetheless, results suggest that conventional systems may not be suitable for low-light-level applications, where tailoring illumination to match spatial and spectral requirements may be the best approach to maximize the performance.
AB - Hyperspectral imaging (HSI) systems collect both morphological and chemical characteristics from a sample by simultaneously acquiring spatial and spectral information. HSI has potential to advance cancer diagnostics by characterizing reectance and uorescence properties of a tissue, as well as extracting microstructural in- formation, all of which are altered through the development of a tumor. Illumination uniformity is a critical pre-condition for extracting quantitative data from an HSI system. Spatial, angular, or spectral non-uniformity can cause glare, specular reection and unwanted shading, which negatively impact statistical analysis tech- niques used to extract abundance of different chemical species. This is further exacerbated when imaging three-dimensional structures, such as tumors, whose appearance can cast shadows and form other occlusions. Furthermore, as HSI can be used simultaneously for white light and uorescence imaging, a exible system, which multiplexes narrowband and broadband illumination is necessary to fully utilize the capabilities of a biomedical HSI system. To address these challenges, we modeled illumination systems frequently used in wide-field biological imaging with the software LightTools and FRED. Each system is characterized for spectral, spatial, and angular uniformity, as well as total effciency. While all three systems provide high spatial and spectral uniformity, the highest angular uniformity is achieved using a diffiuse scattering dome, yielding a contrast of 0.503 and average deviation of 0.303 with a 3.91% model error. Nonetheless, results suggest that conventional systems may not be suitable for low-light-level applications, where tailoring illumination to match spatial and spectral requirements may be the best approach to maximize the performance.
KW - Hyperspectral imaging
KW - Illumination
KW - Modeling
KW - Simulation
KW - Uniformity
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U2 - 10.1117/12.2250633
DO - 10.1117/12.2250633
M3 - Conference contribution
AN - SCOPUS:85020444197
T3 - Progress in Biomedical Optics and Imaging - Proceedings of SPIE
BT - Imaging, Manipulation, and Analysis of Biomolecules, Cells, and Tissues XV
A2 - Farkas, Daniel L.
A2 - Nicolau, Dan V.
A2 - Leif, Robert C.
PB - SPIE
T2 - Imaging, Manipulation, and Analysis of Biomolecules, Cells, and Tissues XV
Y2 - 30 January 2017 through 1 February 2017
ER -