TY - JOUR
T1 - Clonal haematopoiesis and risk of chronic liver disease
AU - NHLBI TOPMed Hematology Working Group
AU - Wong, Waihay J.
AU - Emdin, Connor
AU - Bick, Alexander G.
AU - Zekavat, Seyedeh M.
AU - Niroula, Abhishek
AU - Pirruccello, James P.
AU - Dichtel, Laura
AU - Griffin, Gabriel
AU - Uddin, Md Mesbah
AU - Gibson, Christopher J.
AU - Kovalcik, Veronica
AU - Lin, Amy E.
AU - McConkey, Marie E.
AU - Vromman, Amelie
AU - Sellar, Rob S.
AU - Kim, Peter G.
AU - Agrawal, Mridul
AU - Weinstock, Joshua
AU - Long, Michelle T.
AU - Yu, Bing
AU - Banerjee, Rajarshi
AU - Nicholls, Rowan C.
AU - Dennis, Andrea
AU - Kelly, Matt
AU - Loh, Po Ru
AU - McCarroll, Steve
AU - Boerwinkle, Eric
AU - Vasan, Ramachandran S.
AU - Jaiswal, Siddhartha
AU - Johnson, Andrew D.
AU - Chung, Raymond T.
AU - Corey, Kathleen
AU - Levy, Daniel
AU - Ballantyne, Christie
AU - Abe, Namiko
AU - Abecasis, Gonçalo
AU - Aguet, Francois
AU - Albert, Christine
AU - Almasy, Laura
AU - Alonso, Alvaro
AU - Ament, Seth
AU - Anderson, Peter
AU - Anugu, Pramod
AU - Applebaum-Bowden, Deborah
AU - Ardlie, Kristin
AU - Arking, Dan
AU - Arnett, Donna K.
AU - Ashley-Koch, Allison
AU - Aslibekyan, Stella
AU - Meyers, Deborah A.
N1 - Funding Information:
W.J.W., C. Emdin, B.L.E. and P.N. conceived of, designed and wrote the manuscript for this project. B.L.E. and P.N. provided supervision and project administration and secured financial support. C. Emdin led human genetics data curation and analyses, and W.J.W. led animal experiments and analyses. V.K., A.E.L., M. E. McConkey, A.V., R.S.S., P.G.K. and M.A. carried out experiments and revised the manuscript for intellectual content. A.G.B., S.M.Z., A.N., J.P.P., L.D., G.G., M.M.U. and C.J.G. contributed to human genetic data and revised the manuscript for intellectual content. R. Banerjee, R.C.N., A.D. and M. Kelly analysed the UK Biobank liver imaging data and revised the manuscript for intellectual content. All other authors (J. Weinstock, M.T.L., B.Y., P.-R.L., S. McCarroll, E. Boerwinkle, R.S.V., S.J., A.D.J., R.T.C., K.C., D. Levy and C. Ballantyne) revised the manuscript for intellectual content.
Funding Information:
The UK Biobank analyses were carried out under application numbers 7089 and 50834. The investigators thank the UK Biobank staff and participants. P.N. is supported by a Hassenfeld Scholar Award and the Paul & Phyllis Fireman Endowed Chair in Vascular Medicine from the Massachusetts General Hospital, and grants from the National Heart, Lung, and Blood Institute (R01HL142711, R01HL148565 and R01HL148050) and the National Institute of Diabetes and Digestive and Kidney Diseases (R01DK125782). P.N. and B.L.E. are supported by a grant from the Fondation Leducq (TNE-18CVD04). B.L.E. is also supported by the NIH (R01HL082945, P01CA108631 and P50CA206963) and the Howard Hughes Medical Institute. W.J.W. is supported by a RUNX1 Research Program and Alex’s Lemonade Stand Foundation Early Career Investigator Grant. S.M.Z. was supported by the NIH National Heart, Lung, and Blood Institute (1F30HL149180-01) and the NIH Medical Scientist Training Program Training Grant (T32GM136651). A.N. was supported by funds from the Knut and Alice Wallenberg Foundation (KAW2017.0436). J.P.P. is supported by the NIH (K08HL159346). L.D. was supported by NIH grant K23 DK113220. C.J.G. is supported by the NIH (K08CA263555). R.S.S. is supported by a Kay Kendall Leukaemia Fund Intermediate Fellowship and by a CRUK Advanced Clinician Scientist Fellowship. A.V. received the Harold M. English Fellowship Fund from Harvard Medical School (Boston, USA). P.G.K. is supported by the Damon Runyon Physician-Scientist Award (PST-35-21) and the Edward P. Evans Foundation Evans Young Investigator Award. M.A. was supported by the Deutsche Forschungsgemeinschaft (DFG, AG252/1-1). P.-R.L. is supported by NIH grant DP2 ES030554 and a Burroughs Wellcome Fund Career Award at the Scientific Interfaces. R.T.C. is supported by NIH grants R01AI136715 and R01AI155140, and the MGH Research Scholars Program. Molecular data for the Trans-Omics in Precision Medicine (TOPMed) programme were supported by the National Heart, Lung, and Blood Institute. See Supplementary Table for TOPMed-specific omics support information. Core support including centralized genomic read mapping and genotype calling, along with variant quality metrics and filtering, was provided by the TOPMed Informatics Research Center (3R01HL-117626-02S1; contract HHSN268201800002I). Core support including phenotype harmonization, data management, sample-identity quality control and general programme coordination were provided by the TOPMed Data Coordinating Center (R01HL-120393; U01HL-120393; contract HHSN268201800001I). We gratefully acknowledge the studies and participants who provided biological samples and data for TOPMed. We thank D. K. Li and P. G. Miller for experimental advice and critical reading of the manuscript. The views expressed in this manuscript are those of the authors and do not necessarily represent the views of the National Heart, Lung, and Blood Institute; the National Institutes of Health; or the US Department of Health and Human Services.
Publisher Copyright:
© 2023, The Author(s), under exclusive licence to Springer Nature Limited.
PY - 2023/4/27
Y1 - 2023/4/27
N2 - Chronic liver disease is a major public health burden worldwide1. Although different aetiologies and mechanisms of liver injury exist, progression of chronic liver disease follows a common pathway of liver inflammation, injury and fibrosis2. Here we examined the association between clonal haematopoiesis of indeterminate potential (CHIP) and chronic liver disease in 214,563 individuals from 4 independent cohorts with whole-exome sequencing data (Framingham Heart Study, Atherosclerosis Risk in Communities Study, UK Biobank and Mass General Brigham Biobank). CHIP was associated with an increased risk of prevalent and incident chronic liver disease (odds ratio = 2.01, 95% confidence interval (95% CI) [1.46, 2.79]; P < 0.001). Individuals with CHIP were more likely to demonstrate liver inflammation and fibrosis detectable by magnetic resonance imaging compared to those without CHIP (odds ratio = 1.74, 95% CI [1.16, 2.60]; P = 0.007). To assess potential causality, Mendelian randomization analyses showed that genetic predisposition to CHIP was associated with a greater risk of chronic liver disease (odds ratio = 2.37, 95% CI [1.57, 3.6]; P < 0.001). In a dietary model of non-alcoholic steatohepatitis, mice transplanted with Tet2-deficient haematopoietic cells demonstrated more severe liver inflammation and fibrosis. These effects were mediated by the NLRP3 inflammasome and increased levels of expression of downstream inflammatory cytokines in Tet2-deficient macrophages. In summary, clonal haematopoiesis is associated with an elevated risk of liver inflammation and chronic liver disease progression through an aberrant inflammatory response.
AB - Chronic liver disease is a major public health burden worldwide1. Although different aetiologies and mechanisms of liver injury exist, progression of chronic liver disease follows a common pathway of liver inflammation, injury and fibrosis2. Here we examined the association between clonal haematopoiesis of indeterminate potential (CHIP) and chronic liver disease in 214,563 individuals from 4 independent cohorts with whole-exome sequencing data (Framingham Heart Study, Atherosclerosis Risk in Communities Study, UK Biobank and Mass General Brigham Biobank). CHIP was associated with an increased risk of prevalent and incident chronic liver disease (odds ratio = 2.01, 95% confidence interval (95% CI) [1.46, 2.79]; P < 0.001). Individuals with CHIP were more likely to demonstrate liver inflammation and fibrosis detectable by magnetic resonance imaging compared to those without CHIP (odds ratio = 1.74, 95% CI [1.16, 2.60]; P = 0.007). To assess potential causality, Mendelian randomization analyses showed that genetic predisposition to CHIP was associated with a greater risk of chronic liver disease (odds ratio = 2.37, 95% CI [1.57, 3.6]; P < 0.001). In a dietary model of non-alcoholic steatohepatitis, mice transplanted with Tet2-deficient haematopoietic cells demonstrated more severe liver inflammation and fibrosis. These effects were mediated by the NLRP3 inflammasome and increased levels of expression of downstream inflammatory cytokines in Tet2-deficient macrophages. In summary, clonal haematopoiesis is associated with an elevated risk of liver inflammation and chronic liver disease progression through an aberrant inflammatory response.
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U2 - 10.1038/s41586-023-05857-4
DO - 10.1038/s41586-023-05857-4
M3 - Article
C2 - 37046084
AN - SCOPUS:85152522037
SN - 0028-0836
VL - 616
SP - 747
EP - 754
JO - Nature
JF - Nature
IS - 7958
ER -