Alteration of the N6-methyladenosine epitranscriptomic profile in synthetic phthalate-treated human induced pluripotent stem cell-derived endothelial cells

  • Jordan Jousma
  • , Zhenbo Han
  • , Gege Yan
  • , Sarath Babu Nukala
  • , Youjeong Kwon
  • , Hoai Huong Thi Le
  • , Ya Li
  • , Sang Bing Ong
  • , Won Hee Lee
  • , Sang Ging Ong

Research output: Contribution to journalArticlepeer-review

Abstract

Background: This study aimed to characterize the N6-methyladenosine epitranscriptomic profile induced by mono(2-ethylhexyl) phthalate (MEHP) exposure using a human-induced pluripotent stem cell-derived endothelial cell model. Methods: A multiomic approach was employed by performing RNA sequencing in parallel with an N6-methyladenosine-specific microarray to identify mRNAs, lncRNAs, and miRNAs affected by MEHP exposure. Results: An integrative multiomic analysis identified relevant biological features affected by MEHP, while functional assays provided a phenotypic characterization of these effects. Transcripts regulated by the epitranscriptome were validated with quantitative PCR and methylated RNA immunoprecipitation. Conclusion: The authors' profiling of the epitranscriptome expands the scope of toxicological insights into known environmental toxins to under surveyed cellular contexts and emerging domains of regulation and is, therefore, a valuable resource to human health.

Original languageEnglish (US)
Pages (from-to)1139-1155
Number of pages17
JournalEpigenomics
Volume14
Issue number19
DOIs
StatePublished - 2022

Keywords

  • N-methyladenosine
  • epitranscriptomic
  • iPSCs
  • mono(2-ethylhexyl) phthalate
  • synthetic phthalate
  • toxicology screening

ASJC Scopus subject areas

  • Genetics
  • Cancer Research

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