Alteration of the N6-methyladenosine epitranscriptomic profile in synthetic phthalate-treated human induced pluripotent stem cell-derived endothelial cells

Jordan Jousma, Zhenbo Han, Gege Yan, Sarath Babu Nukala, Youjeong Kwon, Hoai Huong Thi Le, Ya Li, Sang Bing Ong, Won Hee Lee, Sang Ging Ong

Research output: Contribution to journalArticlepeer-review

Abstract

Background: This study aimed to characterize the N6-methyladenosine epitranscriptomic profile induced by mono(2-ethylhexyl) phthalate (MEHP) exposure using a human-induced pluripotent stem cell-derived endothelial cell model. Methods: A multiomic approach was employed by performing RNA sequencing in parallel with an N6-methyladenosine-specific microarray to identify mRNAs, lncRNAs, and miRNAs affected by MEHP exposure. Results: An integrative multiomic analysis identified relevant biological features affected by MEHP, while functional assays provided a phenotypic characterization of these effects. Transcripts regulated by the epitranscriptome were validated with quantitative PCR and methylated RNA immunoprecipitation. Conclusion: The authors' profiling of the epitranscriptome expands the scope of toxicological insights into known environmental toxins to under surveyed cellular contexts and emerging domains of regulation and is, therefore, a valuable resource to human health.

Original languageEnglish (US)
Pages (from-to)1139-1155
Number of pages17
JournalEpigenomics
Volume14
Issue number19
DOIs
StatePublished - 2022

Keywords

  • N-methyladenosine
  • epitranscriptomic
  • iPSCs
  • mono(2-ethylhexyl) phthalate
  • synthetic phthalate
  • toxicology screening

ASJC Scopus subject areas

  • Genetics
  • Cancer Research

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