TY - GEN
T1 - A review of DNA microarray image compression
AU - Hernández-Cabronero, Miguel
AU - Blanes, Ian
AU - Serra-Sagristà, Joan
AU - Marcellin, Michael W.
PY - 2011
Y1 - 2011
N2 - We review the state of the art in DNA micro array image compression. First, we describe the most relevant approaches published in the literature and classify them according to the stage of the typical image compression process where each approach makes its contribution. We then summarize the compression results reported for these specific-specific image compression schemes. In a set of experiments conducted for this paper, we obtain results for several popular image coding techniques, including the most recent coding standards. Prediction-based schemes CALIC and JPEG-LS, and JPEG2000 using zero wavelet decomposition levels are the best performing standard compressors, but are all outperformed by the best micro array-specific technique, Battiato's CNN-based scheme.
AB - We review the state of the art in DNA micro array image compression. First, we describe the most relevant approaches published in the literature and classify them according to the stage of the typical image compression process where each approach makes its contribution. We then summarize the compression results reported for these specific-specific image compression schemes. In a set of experiments conducted for this paper, we obtain results for several popular image coding techniques, including the most recent coding standards. Prediction-based schemes CALIC and JPEG-LS, and JPEG2000 using zero wavelet decomposition levels are the best performing standard compressors, but are all outperformed by the best micro array-specific technique, Battiato's CNN-based scheme.
KW - JPEG2000
KW - image coding standards
KW - microarray image compression
KW - microarray images
UR - http://www.scopus.com/inward/record.url?scp=81255164931&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=81255164931&partnerID=8YFLogxK
U2 - 10.1109/CCP.2011.21
DO - 10.1109/CCP.2011.21
M3 - Conference contribution
AN - SCOPUS:81255164931
SN - 9780769545288
T3 - Proceedings - 1st International Conference on Data Compression, Communication, and Processing, CCP 2011
SP - 139
EP - 147
BT - Proceedings - 1st International Conference on Data Compression, Communication, and Processing, CCP 2011
T2 - 1st International Conference on Data Compression, Communication, and Processing, CCP 2011
Y2 - 21 June 2011 through 24 June 2011
ER -