• Source: Scopus
  • Calculated based on no. of publications stored in Pure and citations from Scopus
1985 …2022

Research activity per year

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Search results

  • Young inversion with multiple linked QTLs under selection in a hybrid zone

    Lee, C. R., Wang, B., Mojica, J. P., Mandáková, T., Prasad, K. V. S. K., Goicoechea, J. L., Perera, N., Hellsten, U., Hundley, H. N., Johnson, J., Grimwood, J., Barry, K., Fairclough, T., Jenkins, J. W., Yu, Y., Kudrna, D., Zhang, J., Talag, J., Golser, W., Ghattas, K. & 6 others, Schranz, M. E., Wing, R., Lysak, M. A., Schmutz, J., Rokhsar, D. S. & Mitchell-Olds, T., Apr 3 2017, In: Nature Ecology and Evolution. 1, 5, 0119.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    60 Scopus citations
  • Whole-genome validation of high-information-content fingerprinting

    Nelson, W. M., Bharti, A. K., Butler, E., Wei, F., Fuks, G., Kim, H. R., Wing, R. A., Messing, J. & Soderlund, C., 2005, In: Plant physiology. 139, 1, p. 27-38 12 p.

    Research output: Contribution to journalReview articlepeer-review

    76 Scopus citations
  • Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying Oryza genome evolution

    Chen, J., Huang, Q., Gao, D., Wang, J., Lang, Y., Liu, T., Li, B., Bai, Z., Luis Goicoechea, J., Liang, C., Chen, C., Zhang, W., Sun, S., Liao, Y., Zhang, X., Yang, L., Song, C., Wang, M., Shi, J., Liu, G. & 21 others, Liu, J., Zhou, H., Zhou, W., Yu, Q., An, N., Chen, Y., Cai, Q., Wang, B., Liu, B., Min, J., Huang, Y., Wu, H., Li, Z., Zhang, Y., Yin, Y., Song, W., Jiang, J., Jackson, S. A., Wing, R. A., Waang, J. & Chen, M., 2013, In: Nature communications. 4, 1595.

    Research output: Contribution to journalArticlepeer-review

    126 Scopus citations
  • Whole genome sequencing: Methodology and progress in cereals

    Yu, Y. & Wing, R. A., 2005, Cereal Genomics. Springer Netherlands, p. 385-423 39 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

    2 Scopus citations
  • Utilization of a zebra finch BAC library to determine the structure of an avian androgen receptor genomic region

    Luo, M., Yu, Y., Kim, H., Kudrna, D., Itoh, Y., Agate, R. J., Melamed, E., Goicoechea, J. L., Talag, J., Mueller, C., Wang, W., Currie, J., Sisneros, N. B., Wing, R. A. & Arnold, A. P., Jan 2006, In: Genomics. 87, 1, p. 181-190 10 p.

    Research output: Contribution to journalArticlepeer-review

    24 Scopus citations
  • Uneven chromosome contraction and expansion in the maize genome

    Bruggmann, R., Bharti, A. K., Gundlach, H., Lai, J., Young, S., Pontaroli, A. C., Wei, F., Haberer, G., Fuks, G., Du, C., Raymond, C., Estep, M. C., Liu, R., Bennetzen, J. L., Chan, A. P., Rabinowicz, P. D., Quackenbush, J., Barbazuk, W. B., Wing, R. A., Birren, B. & 4 others, Nusbaum, C., Rounsley, S., Mayer, K. F. X. & Messing, J., 2006, In: Genome Research. 16, 10, p. 1241-1251 11 p.

    Research output: Contribution to journalArticlepeer-review

    95 Scopus citations
  • Two highly representative rice BAC libraries of japonica cv Tainung 67 suitable for rice structural and functional genomic research

    Lin, Y. R., Chow, T. Y., Luo, M., Kudrna, D., Lin, C. C., Wing, R. A. & Hsing, Y. I. C., Apr 2006, In: Plant Science. 170, 4, p. 889-896 8 p.

    Research output: Contribution to journalArticlepeer-review

  • Two gap-free reference genomes and a global view of the centromere architecture in rice

    Song, J. M., Xie, W. Z., Wang, S., Guo, Y. X., Koo, D. H., Kudrna, D., Gong, C., Huang, Y., Feng, J. W., Zhang, W., Zhou, Y., Zuccolo, A., Long, E., Lee, S., Talag, J., Zhou, R., Zhu, X. T., Yuan, D., Udall, J., Xie, W. & 5 others, Wing, R. A., Zhang, Q., Poland, J., Zhang, J. & Chen, L. L., Oct 4 2021, In: Molecular Plant. 14, 10, p. 1757-1767 11 p.

    Research output: Contribution to journalArticlepeer-review

    11 Scopus citations
  • Transposons play an important role in the evolution and diversification of centromeres among closely related species

    Gao, D., Jiang, N., Wing, R. A., Jiang, J. & Jackson, S. A., Apr 7 2015, In: Frontiers in Plant Science. 6, APR, 216.

    Research output: Contribution to journalArticlepeer-review

    36 Scopus citations
  • Transposable element distribution, abundance and role in genome size variation in the genus Oryza

    Zuccolo, A., Sebastian, A., Talag, J., Yu, Y., Kim, H. R., Collura, K., Kudrna, D. & Wing, R. A., 2007, In: BMC Evolutionary Biology. 7, 152.

    Research output: Contribution to journalArticlepeer-review

    85 Scopus citations
  • Tracing ancestor rice of Suriname Maroons back to its African origin

    Van Andel, T. R., Meyer, R. S., Aflitos, S. A., Carney, J. A., Veltman, M. A., Copetti, D., Flowers, J. M., Havinga, R. M., Maat, H., Purugganan, M. D., Wing, R. A. & Schranz, M. E., Oct 3 2016, In: Nature plants. 2, 16149.

    Research output: Contribution to journalLetterpeer-review

    21 Scopus citations
  • Toward integration of comparative genetic, physical, diversity, and cytomolecular maps for grasses and grains, using the sorghum genome as a foundation

    Draye, X., Lin, Y. R., Qian, X. Y., Bowers, J. E., Burow, G. B., Morrell, P. L., Peterson, D. G., Presting, G. G., Ren, S. X., Wing, R. A. & Paterson, A. H., 2001, In: Plant physiology. 125, 3, p. 1325-1341 17 p.

    Research output: Contribution to journalArticlepeer-review

    69 Scopus citations
  • Toward closing rice telomere gaps: Mapping and sequence characterization of rice subtelomere regions

    Yang, T. J., Yu, Y., Chang, S. B., De Jong, H., Oh, C. S., Ahn, S. N., Fang, E. & Wing, R. A., Aug 2005, In: Theoretical and Applied Genetics. 111, 3, p. 467-478 12 p.

    Research output: Contribution to journalArticlepeer-review

    19 Scopus citations
  • Toward a cytological characterization of the rice genome

    Cheng, Z., Buell, C. R., Wing, R. A., Gu, M. & Jiang, J., 2001, In: Genome Research. 11, 12, p. 2133-2141 9 p.

    Research output: Contribution to journalArticlepeer-review

    161 Scopus citations
  • The wild relative of Rice: Genomes and genomics

    Sanchez, P. L., Wing, R. A. & Brar, D. S., Jan 1 2013, Genetics and Genomics of Rice. Springer New York, p. 9-25 17 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

    63 Scopus citations
  • The tomato genome sequence provides insights into fleshy fruit evolution

    Sato, S., Tabata, S., Hirakawa, H., Asamizu, E., Shirasawa, K., Isobe, S., Kaneko, T., Nakamura, Y., Shibata, D., Aoki, K., Egholm, M., Knight, J., Bogden, R., Li, C., Shuang, Y., Xu, X., Pan, S., Cheng, S., Liu, X., Ren, Y. & 299 others, Wang, J., Albiero, A., Dal Pero, F., Todesco, S., Van Eck, J., Buels, R. M., Bombarely, A., Gosselin, J. R., Huang, M., Leto, J. A., Menda, N., Strickler, S., Mao, L., Gao, S., Tecle, I. Y., York, T., Zheng, Y., Vrebalov, J. T., Lee, J., Zhong, S., Mueller, L. A., Stiekema, W. J., Ribeca, P., Alioto, T., Yang, W., Huang, S., Du, Y., Zhang, Z., Gao, J., Guo, Y., Wang, X., Li, Y., He, J., Li, C., Cheng, Z., Zuo, J., Ren, J., Zhao, J., Yan, L., Jiang, H., Wang, B., Li, H., Li, Z., Fu, F., Chen, B., Han, B., Feng, Q., Fan, D., Wang, Y., Ling, H., Xue, Y., Ware, D., Richard McCombie, W., Lippman, Z. B., Chia, J. M., Jiang, K., Pasternak, S., Gelley, L., Kramer, M., Anderson, L. K., Chang, S. B., Royer, S. M., Shearer, L. A., Stack, S. M., Rose, J. K. C., Xu, Y., Eannetta, N., Matas, A. J., McQuinn, R., Tanksley, S. D., Camara, F., Guigó, R., Rombauts, S., Fawcett, J., Van De Peer, Y., Zamir, D., Liang, C., Spannagl, M., Gundlach, H., Bruggmann, R., Mayer, K., Jia, Z., Zhang, J., Ye, Z., Bishop, G. J., Butcher, S., Lopez-Cobollo, R., Buchan, D., Filippis, I., Abbott, J., Dixit, I. R., Singh, M., Singh, A., Pal, J. K., Pandit, A., Singh, P. K., Mahato, A. K., Dogra, V., Gaikwad, K., Sharma, T. R., Mohapatra, T., Singh, N. K., Causse, M., Rothan, C., Noirot, C., Bellec, A., Klopp, C., Delalande, C., Berges, H., Mariette, J., Frasse, P., Vautrin, S., Zouine, T. M., Latché, A., Rousseau, C., Regad, F., Pech, J. C., Philippot, M., Bouzayen, M., Pericard, P., Osorio, S., Del Carmen, A. F., Monforte, A., Granell, A., Fernandez-Muñoz, R., Conte, M., Lichtenstein, G., Carrari, F., De Bellis, G., Fuligni, F., Peano, C., Grandillo, S., Termolino, P., Pietrella, M., Fantini, E., Falcone, G., Fiore, A., Giuliano, G., Lopez, L., Facella, P., Perrotta, G., Daddiego, L., Bryan, G., Orozco, B. M., Pastor, X., Torrents, D., Van Schriek, M. G. M., Feron, R. M. C., Van Oeveren, J., De Heer, P., Da Ponte, L., Jacobs-Oomen, S., Cariaso, M., Prins, M., Van Eijk, M. J. T., Janssen, A., Van Haaren, J. J., -HwanJo, S., Kim, J., Kwon, S. Y., Kim, S., Koo, D. H., Lee, S., Clouser, C., Rico, A., Hallab, A., Gebhardt, C., Klee, K., Jöcker, A., Warfsmann, J., Göbel, U., Kawamura, S., Yano, K., Sherman, J. D., Fukuoka, H., Negoro, S., Bhutty, S., Chowdhury, P., Chattopadhyay, D., Datema, E., Smit, S., Schijlen, E. G. W. M., Van De Belt, J., Van Haarst, J. C., Peters, S. A., Van Staveren, M. J., Henkens, M. H. C., Mooyman, P. J. W., Hesselink, T., Van Ham, R. C. H. J., Jiang, G., Droege, M., Choi, D., Kang, B. C., Kim, B. D., Park, M., Kim, S., Yeom, S. I., Lee, Y. H., Choi, Y. D., Li, G., Gao, J., Liu, Y., Huang, S., Fernandez-Pedrosa, V., Collado, C., Zuñ Iga, S., Wang, G., Cade, R., Dietrich, R. A., Rogers, J., Knapp, S., Fei, Z., White, R. A., Thannhauser, T. W., Giovannoni, J. J., Botella, M. A., Gilbert, L., Gonzalez, F. R., Goicoechea, J. L., Yu, Y., Kudrna, D., Collura, K., Wissotski, M., Wing, R., Meyers, B. C., Gurazada, A. B., Green, P. J., Mathur, S., Vyas, S., Solanke, A. U., Kumar, R., Gupta, V., Sharma, A. K., Khurana, P., Khurana, J. P., Tyagi, A. K., Dalmay, T., Mohorianu, I., Walts, B., Chamala, S., Barbazuk, W. B., Li, J., Guo, H., Lee, T. H., Wang, Y., Zhang, D., Paterson, A. H., Wang, X., Tang, H., Barone, A., Chiusano, M. L., Ercolano, M. R., D'Agostino, N., Di Filippo, M., Traini, A., Sanseverino, W., Frusciante, L., Seymour, G. B., Elharam, M., Fu, Y., Hua, A., Kenton, S., Lewis, J., Lin, S., Najar, F., Lai, H., Qin, B., Shi, R., Qu, C., White, D., White, J., Xing, Y., Yang, K., Yi, J., Yao, Z., Zhou, L., Roe, B. A., Vezzi, A., D'Angelo, M., Zimbello, R., Schiavon, R., Caniato, E., Rigobello, C., Campagna, D., Vitulo, N., Valle, G., Nelson, D. R., De Paoli, E., Szinay, D., De Jong, H. H., Bai, Y., Visser, R. G. F., Lankhorst, R. K., Beasley, H., McLaren, K., Nicholson, C., Riddle, C. & Gianese, G., 2012, In: Nature. 485, 7400, p. 635-641 7 p.

    Research output: Contribution to journalArticlepeer-review

    2031 Scopus citations
  • The subtelomere of Oryza sativa chromosome 3 short arm as a hot bed of new gene origination in rice

    Fan, C., Zhang, Y., Yu, Y., Rounsley, S., Long, M. & Wing, R. A., Sep 2008, In: Molecular Plant. 1, 5, p. 839-850 12 p.

    Research output: Contribution to journalArticlepeer-review

    27 Scopus citations
  • The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications

    Choisne, N., Demange, N., Orjeda, G., Samain, S., D'Hont, A., Cattolico, L., Pelletier, E., Couloux, A., Segurens, B., Wincker, P., Scarpelli, C., Weissenbach, J., Salanoubat, M., Singh, N. K., Mohapatra, T., Sharma, T. R., Gaikwad, K., Singh, A., Dalal, V., Srivastava, S. K. & 79 others, Dixit, A., Pal, A. K., Ghazi, I. A., Yadav, M., Pandit, A., Bhargava, A., Sureshbabu, K., Dixit, R., Singh, H., Swain, S. C., Pal, S., Ragiba, M., Singh, P. K., Singhal, V., Mendiratta, S. D., Batra, K., Raghuvanshi, S., Mohanty, A., Bharti, A. K., Gaur, A., Gupta, V., Kumar, D., Vydianathan, R., Vij, S., Kapur, A., Khurana, P., Sharma, S., Khurana, P., Khurana, J. P., Tyagi, A. K., Yuan, Q., Ouyang, S., Liu, J., Zhu, W., Wang, A., Lin, H., Hamilton, J., Haas, B., Wortman, J., Jones, K. M., Kim, M., Overton, L., Tsitrin, T., Fadrosh, D., Bera, J., Weaver, B., Jin, S., Johri, S., Reardon, M., Vuong, H., Tallon, L., Van Aken, S., Lewis, M., Utterback, T., Feldblyum, T., Zismann, V., Iobst, S., Hsiao, J., de Vazeille, A. R., Salzberg, S. L., White, O., Fraser, C., Buell, C. R., Yu, Y., Rambo, T., Currie, J., Collura, K., Kim, H. R., Stum, D., Wang, W., Kudrna, D., Mueller, C., Wing, R. A., Kramer, M., Spiegel, L., Nascimento, L., Preston, R., Zutavern, T. & Messing, J., Sep 27 2005, In: BMC biology. 3, 20.

    Research output: Contribution to journalArticlepeer-review

    148 Scopus citations
  • The rice paradox: Multiple origins but single domestication in Asian Rice

    Choi, J. Y., Platts, A. E., Fuller, D. Q., Hsing, Y. I., Wing, R. A., Purugganan, M. D. & Kim, Y., Apr 1 2017, In: Molecular biology and evolution. 34, 4, p. 969-979 11 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    127 Scopus citations
  • The rice genome revolution: From an ancient grain to Green Super Rice

    Wing, R. A., Purugganan, M. D. & Zhang, Q., Aug 1 2018, In: Nature Reviews Genetics. 19, 8, p. 505-517 13 p.

    Research output: Contribution to journalReview articlepeer-review

    123 Scopus citations
  • The Rice Annotation Project Database (RAP-DB): 2008 update

    Tanaka, T., Antonio, B. A., Kikuchi, S., Matsumoto, T., Nagamura, Y., Numa, H., Sakai, H., Wu, J., Itoh, T., Sasaki, T., Aono, R., Fujii, Y., Habara, T., Harada, E., Kanno, M., Kawahara, Y., Kawashima, H., Kubooka, H., Matsuya, A., Nakaoka, H. & 71 others, Saichi, N., Sanbonmatsu, R., Sato, Y., Shinso, Y., Suzuki, M., Takeda, J., Tanino, M., Todokoro, F., Yamaguchi, K., Yamamoto, N., Yamasaki, C., Imanishi, T., Okido, T., Tada, M., Ikeo, K., Tateno, Y., Gojobori, T., Lin, Y. C., Wei, F. J., Hsing, Y., Zhao, Q., Han, B., Kramer, M. R., McCombie, R. W., Lonsdale, D., O’donovan, C. C., Whitfield, E. J., Apweiler, R., Koyanagi, K. O., Khurana, J. P., Raghuvanshi, S., Singh, N. K., Tyagi, A. K., Haberer, G., Fujisawa, M., Hosokawa, S., Ito, Y., Ikawa, H., Shibata, M., Yamamoto, M., Bruskiewich, R. M., Hoen, D. R., Bureau, T. E., Namiki, N., Ohyanagi, H., Sakai, Y., Nobushima, S., Sakata, K., Barrero, R. A., Sato, Y., Souvorov, A., Smith-White, B., Tatusova, T., An, S., An, G., Oota, S., Fuks, G., Messing, J., Christie, K. R., Lieberherr, D., Kim, H., Zuccolo, A., Wing, R. A., Nobuta, K., Green, P. J., Lu, C., Meyers, B. C., Chaparro, C., Piegu, B., Panaud, O. & Echeverria, M., Jan 1 2008, In: Nucleic acids research. 36, SUPPL. 1, p. D1028-D1033

    Research output: Contribution to journalArticlepeer-review

    Open Access
    284 Scopus citations
  • The reference genome of the halophytic plant Eutrema salsugineum

    Yang, R., Jarvis, D. E., Chen, H., Beilstein, M. A., Grimwood, J., Jenkins, J., Shu, S. Q., Prochnik, S., Xin, M., Ma, C., Schmutz, J., Wing, R. A., Mitchell-Olds, T., Schumaker, K. S. & Wang, X., Mar 21 2013, In: Frontiers in Plant Science. 4, MAR, 46.

    Research output: Contribution to journalArticlepeer-review

    149 Scopus citations
  • The promoter signatures in rice LEA genes can be used to build a co-expressing LEA gene network

    Meier, S., Gehring, C., MacPherson, C. R., Kaur, M., Maqungo, M., Reuben, S., Muyanga, S., Shih, M. D., Wei, F. J., Wanchana, S., Mauleon, R., Radovanovic, A., Bruskiewich, R., Tanaka, T., Mohanty, B., Itoh, T., Wing, R., Gojobori, T., Sasaki, T., Swarup, S. & 2 others, Hsing, Y. I. & Bajic, V. B., Dec 2008, In: Rice. 1, 2, p. 177-187 11 p.

    Research output: Contribution to journalArticlepeer-review

    13 Scopus citations
  • The physical and genetic framework of the maize B73 genome

    Wei, F., Zhang, J., Zhou, S., He, R., Schaeffer, M., Collura, K., Kudrna, D., Faga, B. P., Wissotski, M., Golser, W., Rock, S. M., Graves, T. A., Fulton, R. S., Coe, E., Schnable, P. S., Schwartz, D. C., Ware, D., Clifton, S. W., Wilson, R. K. & Wing, R. A., Nov 2009, In: PLoS genetics. 5, 11, e1000715.

    Research output: Contribution to journalArticlepeer-review

    80 Scopus citations
  • The oryza map alignment project (OMAP): A new resource for comparative genome studies within oryza

    Wing, R. A., Kim, H., Goicoechea, J. L., Yu, Y., Kudrna, D., Zuccolo, A., Ammiraju, J. S. S., Luo, M., Nelson, W., Ma, J., Sanmiguel, P., Hurwitz, B., Ware, D., Brar, D., Mackill, D., Soderlund, C., Stein, L. & Jackson, S., 2007, Rice Functional Genomics: Challenges, Progress and Prospects. Springer New York, p. 395-409 15 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

    9 Scopus citations
  • The Oryza map alignment project: The golden path to unlocking the genetic potential of wild rice species

    Wing, R. A., Ammiraju, J. S. S., Luo, M., Kim, H. R., Yu, Y., Kudrna, D., Goicoechea, J. L., Wang, W., Nelson, W., Rao, K., Brar, D., Mackill, D. J., Han, B., Soderlund, C., Stein, L., SanMiguel, P. & Jackson, S., Sep 2005, In: Plant Molecular Biology. 59, 1, p. 53-62 10 p.

    Research output: Contribution to journalArticlepeer-review

    127 Scopus citations
  • The Oryza bacterial artificial chromosome library resource: Construction and analysis of 12 deep-coverage large-insert BAC libraries that represent the 10 genome types of the genus Oryza

    Ammiraju, J. S. S., Luo, M., Goicoechea, J. L., Wang, W., Kudrna, D., Mueller, C., Talag, J., Kim, H. R., Sisneros, N. B., Blackmon, B., Fang, E., Tomkins, J. B., Brar, D., MacKill, D., McCouch, S., Kurata, N., Lambert, G., Galbraith, D. W., Arumuganathan, K., Rao, K. & 7 others, Walling, J. G., Gill, N., Yu, Y., SanMiguel, P., Soderlund, C., Jackson, S. & Wing, R. A., Jan 2006, In: Genome Research. 16, 1, p. 140-147 8 p.

    Research output: Contribution to journalArticlepeer-review

    177 Scopus citations
  • The Oryza BAC resource: A genus-wide and genome scale tool for exploring rice genome evolution and leveraging useful genetic diversity from wild relatives

    Ammiraju, J. S. S., Song, X., Luo, M., Sisneros, N., Angelova, A., Kudrna, D., Kim, H., Yu, Y., Goicoechea, J. L., Lorieux, M., Kurata, N., Brar, D., Ware, D., Jackson, S. & Wing, R. A., 2010, In: Breeding Science. 60, 5, p. 536-543 8 p.

    Research output: Contribution to journalReview articlepeer-review

    23 Scopus citations
  • The Mla (powdery mildew) resistance cluster is associated with three NBS-LRR gene families and suppressed recombination within a 240-kb DNA interval on chromosome 5S (1HS) of barley

    Wei, F., Gobelman-Werner, K., Morroll, S. M., Kurth, J., Mao, L., Wing, R., Leister, D., Schulze-Lefert, P. & Wise, R. P., Dec 1999, In: Genetics. 153, 4, p. 1929-1948 20 p.

    Research output: Contribution to journalArticlepeer-review

    219 Scopus citations
  • The map-based sequence of the rice genome

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  • The International Oryza Map Alignment Project: Development of a genus-wide comparative genomics platform to help solve the 9 billion-people question

    Jacquemin, J., Bhatia, D., Singh, K. & Wing, R. A., May 2013, In: Current Opinion in Plant Biology. 16, 2, p. 147-156 10 p.

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  • The impact and origin of copy number variations in the Oryza species

    Bai, Z., Chen, J., Liao, Y., Wang, M., Liu, R., Ge, S., Wing, R. A. & Chen, M., 2016, In: BMC genomics. 17, 1, 261.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    25 Scopus citations
  • The Hybaid Lecture. Microcollinearity and segmental duplication in the evolution of grass nuclear genomes.

    Bennetzen, J. L., SanMiguel, P., Liu, C. N., Chen, M., Tikhonov, A., Costa de Oliveira, A., Jin, Y. K., Avramova, Z., Woo, S. S., Zhang, H. & Wing, R. A., 1996, In: Symposia of the Society for Experimental Biology. 50, p. 1-3 3 p.

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    4 Scopus citations
  • The Genomics of Oryza Species Provides Insights into Rice Domestication and Heterosis

    Chen, E., Huang, X., Tian, Z., Wing, R. A. & Han, B., Apr 2019, In: Annual Review of Plant Biology. 70, p. 639-665 27 p.

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    42 Scopus citations
  • The genome sequence of African rice (Oryza glaberrima) and evidence for independent domestication

    Wang, M., Yu, Y., Haberer, G., Marri, P. R., Fan, C., Goicoechea, J. L., Zuccolo, A., Song, X., Kudrna, D., Ammiraju, J. S. S., Cossu, R. M., Maldonado, C., Chen, J., Lee, S., Sisneros, N., De Baynast, K., Golser, W., Wissotski, M., Kim, W., Sanchez, P. & 11 others, Ndjiondjop, M. N., Sanni, K., Long, M., Carney, J., Panaud, O., Wicker, T., MacHado, C. A., Chen, M., Mayer, K. F. X., Rounsley, S. & Wing, R. A., 2014, In: Nature Genetics. 46, 9, p. 982-988 7 p.

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    227 Scopus citations
  • The genome of Theobroma cacao

    Argout, X., Salse, J., Aury, J. M., Guiltinan, M. J., Droc, G., Gouzy, J., Allegre, M., Chaparro, C., Legavre, T., Maximova, S. N., Abrouk, M., Murat, F., Fouet, O., Poulain, J., Ruiz, M., Roguet, Y., Rodier-Goud, M., Barbosa-Neto, J. F., Sabot, F., Kudrna, D. & 41 others, Ammiraju, J. S. S., Schuster, S. C., Carlson, J. E., Sallet, E., Schiex, T., Dievart, A., Kramer, M., Gelley, L., Shi, Z., Bérard, A., Viot, C., Boccara, M., Risterucci, A. M., Guignon, V., Sabau, X., Axtell, M. J., Ma, Z., Zhang, Y., Brown, S., Bourge, M., Golser, W., Song, X., Clement, D., Rivallan, R., Tahi, M., Akaza, J. M., Pitollat, B., Gramacho, K., D'Hont, A., Brunel, D., Infante, D., Kebe, I., Costet, P., Wing, R., McCombie, W. R., Guiderdoni, E., Quetier, F., Panaud, O., Wincker, P., Bocs, S. & Lanaud, C., Feb 2011, In: Nature Genetics. 43, 2, p. 101-108 8 p.

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    485 Scopus citations
  • The future of rice genomics: Sequencing the collective Oryza genome

    Goicoechea, J. L., Ammiraju, J. S. S., Marri, P. R., Chen, M., Jackson, S., Yu, Y., Rounsley, S. & Wing, R. A., Sep 2010, In: Rice. 3, 2-3, p. 89-97 9 p.

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  • The Dark Side of the Genome: Revealing the Native Transposable Element/Repeat Content of Eukaryotic Genomes

    Copetti, D. & Wing, R. A., Dec 5 2016, In: Molecular Plant. 9, 12, p. 1664-1666 3 p.

    Research output: Contribution to journalLetterpeer-review

    Open Access
    2 Scopus citations
  • The chromosome-scale reference genome of safflower (Carthamus tinctorius) provides insights into linoleic acid and flavonoid biosynthesis

    Wu, Z., Liu, H., Zhan, W., Yu, Z., Qin, E., Liu, S., Yang, T., Xiang, N., Kudrna, D., Chen, Y., Lee, S., Li, G., Wing, R. A., Liu, J., Xiong, H., Xia, C., Xing, Y., Zhang, J. & Qin, R., Sep 2021, In: Plant Biotechnology Journal. 19, 9, p. 1725-1742 18 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    8 Scopus citations
  • The Cardamine hirsuta genome offers insight into the evolution of morphological diversity

    Gan, X., Hay, A., Kwantes, M., Haberer, G., Hallab, A., Ioio, R. D., Hofhuis, H., Pieper, B., Cartolano, M., Neumann, U., Nikolov, L. A., Song, B., Hajheidari, M., Briskine, R., Kougioumoutzi, E., Vlad, D., Broholm, S., Hein, J., Meksem, K., Lightfoot, D. & 11 others, Shimizu, K. K., Shimizu-Inatsugi, R., Imprialou, M., Kudrna, D., Wing, R., Sato, S., Huijser, P., Filatov, D., Mayer, K. F. X., Mott, R. & Tsiantis, M., Oct 31 2016, In: Nature plants. 2, 16167.

    Research output: Contribution to journalArticlepeer-review

    Open Access
    52 Scopus citations
  • The barley ERF-type transcription factor HvRAF confers enhanced pathogen resistance and salt tolerance in Arabidopsis

    Jung, J., Won, S. Y., Suh, S. C., Kim, H., Wing, R., Jeong, Y., Hwang, I. & Kim, M., Feb 2007, In: Planta. 225, 3, p. 575-588 14 p.

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  • The B73 maize genome: Complexity, diversity, and dynamics

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  • The asparagus genome sheds light on the origin and evolution of a young y chromosome

    Harkess, A., Zhou, J., Xu, C., Bowers, J. E., Van Der Hulst, R., Ayyampalayam, S., Mercati, F., Riccardi, P., McKain, M. R., Kakrana, A., Tang, H., Ray, J., Groenendijk, J., Arikit, S., Mathioni, S. M., Nakano, M., Shan, H., Telgmann-Rauber, A., Kanno, A., Yue, Z. & 22 others, Chen, H., Li, W., Chen, Y., Xu, X., Zhang, Y., Luo, S., Chen, H., Gao, J., Mao, Z., Pires, J. C., Luo, M., Kudrna, D., Wing, R. A., Meyers, B. C., Yi, K., Kong, H., Lavrijsen, P., Sunseri, F., Falavigna, A., Ye, Y., Leebens-Mack, J. H. & Chen, G., Dec 1 2017, In: Nature communications. 8, 1, 1279.

    Research output: Contribution to journalArticlepeer-review

    Open Access
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  • The Ashbya gossypii Genome as a Tool for Mapping the Ancient Saccharomyces cerevisiae Genome

    Dietrich, F. S., Voegeli, S., Brachat, S., Lerch, A., Gates, K., Steiner, S., Mohr, C., Pöhlmann, R., Luedi, P., Choi, S., Wing, R. A., Flavier, A., Gaffney, T. D. & Philippsen, P., Apr 9 2004, In: Science. 304, 5668, p. 304-307 4 p.

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  • The Amborella genome and the evolution of flowering plants

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  • The Amborella genome: An evolutionary reference for plant biology

    Soltis, D. E., Albert, V. A., Leebens-Mack, J., Palmer, J. D., Wing, R. A., dePamphilis, C. W., Ma, H., Carlson, J. E., Altman, N., Kim, S., Kerr, P. K., Zuccolo, A. & Soltis, P. S., Mar 10 2008, In: Genome biology. 9, 3, 402.

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  • The 19 genomes of Drosophila: A BAC library resource for genus-wide and genome-scale comparative evolutionary research

    Song, X., Goicoechea, J. L., Ammiraju, J. S. S., Luo, M., He, R., Lin, J., Lee, S. J., Sisneros, N., Watts, T., Kudrna, D. A., Golser, W., Ashley, E., Collura, K., Braidotti, M., Yu, Y., Matzkin, L. M., McAllister, B. F., Markow, T. A. & Wing, R. A., Apr 2011, In: Genetics. 187, 4, p. 1023-1030 8 p.

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  • Tetraploid nature of Sorghum bicolor (L.) Moench

    Gómez, M. I., Islam-Faridi, M. N., Zwick, M. S., Czeschin, D. G., Hart, G. E., Wing, R. A., Stelly, D. M. & Price, H. J., Mar 1998, In: Journal of Heredity. 89, 2, p. 188-190 3 p.

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  • Structure and architecture of the maize genome

    Haberer, G., Young, S., Bharti, A. K., Gundlach, H., Raymond, C., Fuks, G., Butler, E., Wing, R. A., Rounsley, S., Birren, B., Nusbaum, C., Mayer, K. F. X. & Messing, J., 2005, In: Plant physiology. 139, 4, p. 1612-1624 13 p.

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  • Structural variants in 3000 rice genomes

    Fuentes, R. R., Chebotarov, D., Duitama, J., Smith, S., De la Hoz, J. F., Mohiyuddin, M., Wing, R. A., McNally, K. L., Tatarinova, T., Grigoriev, A., Mauleon, R. & Alexandrov, N., May 2019, In: Genome Research. 29, 5, p. 870-880 11 p.

    Research output: Contribution to journalArticlepeer-review

    Open Access
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