Datasets
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Additional file 4: Figure S1. of The impact and origin of copy number variations in the Oryza species
Bai, Z. (Contributor), Chen, J. (Contributor), Liao, Y. (Creator), Wang, M. (Contributor), Liu, R. (Creator), Ge, S. (Creator), Wing, R. A. (Creator) & Chen, M. (Contributor), figshare, 2016
DOI: 10.6084/m9.figshare.c.3597560_d1, https://springernature.figshare.com/articles/figure/Additional_file_4_Figure_S1_of_The_impact_and_origin_of_copy_number_variations_in_the_Oryza_species/4322474
Dataset
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Long-read genome sequencing of bread wheat facilitates disease resistance gene cloning
Athiyannan, N. (Contributor), Abrouk, M. (Contributor), Boshoff, W. H. P. (Contributor), Cauet, S. (Contributor), Rodde, N. (Contributor), Kudrna, D. A. (Contributor), Mohammed, N. (Contributor), Bettgenhaeuser, J. (Contributor), Botha, K. (Contributor), Derman, S. (Contributor), Wing, R. A. (Contributor), Prins, R. (Contributor) & Krattinger, S. G. (Contributor), ZENODO, Dec 30 2021
DOI: 10.5061/dryad.nk98sf7td, https://zenodo.org/records/5810839
Dataset
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Additional file 9: Table S8. of The impact and origin of copy number variations in the Oryza species
Bai, Z. (Contributor), Chen, J. (Contributor), Liao, Y. (Creator), Wang, M. (Contributor), Liu, R. (Creator), Ge, S. (Creator), Wing, R. A. (Creator) & Chen, M. (Contributor), figshare, 2016
DOI: 10.6084/m9.figshare.c.3597560_d6, https://springernature.figshare.com/articles/dataset/Additional_file_9_Table_S8_of_The_impact_and_origin_of_copy_number_variations_in_the_Oryza_species/4322567
Dataset
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Additional file 3 of Gene fusion as an important mechanism to generate new genes in the genus Oryza
Zhou, Y. (Creator), Zhang, C. (Creator), Zhang, L. (Creator), Ye, Q. (Creator), Liu, N. (Creator), Wang, M. (Creator), Long, G. (Creator), Fan, W. (Creator), Long, M. (Creator) & Wing, R. A. (Creator), figshare, 2022
DOI: 10.6084/m9.figshare.20081159.v1, https://springernature.figshare.com/articles/dataset/Additional_file_3_of_Gene_fusion_as_an_important_mechanism_to_generate_new_genes_in_the_genus_Oryza/20081159/1
Dataset
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Additional file 10 of Gene fusion as an important mechanism to generate new genes in the genus Oryza
Zhou, Y. (Creator), Zhang, C. (Creator), Zhang, L. (Creator), Ye, Q. (Creator), Liu, N. (Creator), Wang, M. (Creator), Long, G. (Creator), Fan, W. (Creator), Long, M. (Creator) & Wing, R. A. (Creator), figshare, 2022
DOI: 10.6084/m9.figshare.20081147, https://springernature.figshare.com/articles/dataset/Additional_file_10_of_Gene_fusion_as_an_important_mechanism_to_generate_new_genes_in_the_genus_Oryza/20081147
Dataset
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Additional file 10 of Gene fusion as an important mechanism to generate new genes in the genus Oryza
Zhou, Y. (Creator), Zhang, C. (Creator), Zhang, L. (Creator), Ye, Q. (Creator), Liu, N. (Creator), Wang, M. (Creator), Long, G. (Creator), Fan, W. (Creator), Long, M. (Creator) & Wing, R. A. (Creator), figshare, 2022
DOI: 10.6084/m9.figshare.20081147.v1, https://springernature.figshare.com/articles/dataset/Additional_file_10_of_Gene_fusion_as_an_important_mechanism_to_generate_new_genes_in_the_genus_Oryza/20081147/1
Dataset
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Additional file 2 of Gene fusion as an important mechanism to generate new genes in the genus Oryza
Zhou, Y. (Creator), Zhang, C. (Creator), Zhang, L. (Creator), Ye, Q. (Creator), Liu, N. (Creator), Wang, M. (Creator), Long, G. (Creator), Fan, W. (Creator), Long, M. (Creator) & Wing, R. A. (Creator), figshare, 2022
DOI: 10.6084/m9.figshare.20081156.v1, https://springernature.figshare.com/articles/dataset/Additional_file_2_of_Gene_fusion_as_an_important_mechanism_to_generate_new_genes_in_the_genus_Oryza/20081156/1
Dataset
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Additional file 6 of Gene fusion as an important mechanism to generate new genes in the genus Oryza
Zhou, Y. (Creator), Zhang, C. (Creator), Zhang, L. (Creator), Ye, Q. (Creator), Liu, N. (Creator), Wang, M. (Creator), Long, G. (Creator), Fan, W. (Creator), Long, M. (Creator) & Wing, R. A. (Creator), figshare, 2022
DOI: 10.6084/m9.figshare.20081171.v1, https://springernature.figshare.com/articles/dataset/Additional_file_6_of_Gene_fusion_as_an_important_mechanism_to_generate_new_genes_in_the_genus_Oryza/20081171/1
Dataset
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Data from: Extensive gene tree discordance and hemiplasy shaped the genomes of North American columnar cacti
Copetti, D. (Creator), Búrquez, A. (Contributor), Bustamante, E. (Creator), Charboneau, J. L. M. (Creator), Childs, K. L. (Creator), Eguiarte, L. E. (Creator), Lee, S. (Creator), Liu, T. L. (Creator), McMahon, M. M. (Creator), Whiteman, N. K. (Creator), Wing, R. A. (Creator), Wojciechowski, M. F. (Creator) & Sanderson, M. J. (Creator), Dryad, Oct 27 2018
DOI: 10.5061/dryad.72c2g, https://datadryad.org/dataset/doi:10.5061/dryad.72c2g
Dataset
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Assembly and annotation of the saguaro cactus genome – SGP5p v2
Copetti, D. (Contributor), Burquez, A. (Contributor), Wing, R. (Contributor), Sanderson, M. (Contributor) & Wojciechowski, M. (Contributor), ZENODO, Apr 24 2023
DOI: 10.5061/dryad.hdr7sqvnp, https://zenodo.org/records/7859713
Dataset
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Additional file 3 of Exceptional lability of a genomic complex in rice and its close relatives revealed by interspecific and intraspecific comparison and population analysis
Tian, Z. (Contributor), Yu, Y. (Contributor), Lin, F. (Creator), Yu, Y. (Contributor), SanMiguel, P. J. (Creator), Wing, R. A. (Creator), McCouch, S. R. (Creator), Ma, J. (Contributor) & Jackson, S. A. (Creator), figshare, 2020
DOI: 10.6084/m9.figshare.12879029, https://springernature.figshare.com/articles/presentation/Additional_file_3_of_Exceptional_lability_of_a_genomic_complex_in_rice_and_its_close_relatives_revealed_by_interspecific_and_intraspecific_comparison_and_population_analysis/12879029
Dataset
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Data from: Disentangling methodological and biological sources of gene tree discordance on Oryza (Poaceae) chromosome 3
Zwickl, D. J. (Creator), Stein, J. C. (Creator), Wing, R. A. (Creator), Ware, D. (Creator) & Sanderson, M. J. (Creator), Dryad Digital Repository, 2014
DOI: 10.5061/dryad.6169b.2, https://datadryad.org/resource/doi:10.5061/dryad.6169b.2
Dataset
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Data from: Extensive gene tree discordance and hemiplasy shaped the genomes of North American columnar cacti
Copetti, D. (Contributor), Búrquez, A. (Contributor), Bustamante, E. (Contributor), Charboneau, J. L. M. (Contributor), Childs, K. L. (Contributor), Eguiarte, L. E. (Contributor), Lee, S. (Contributor), Liu, T. L. (Contributor), McMahon, M. M. (Contributor), Whiteman, N. K. (Contributor), Wing, R. A. (Contributor), Wojciechowski, M. F. (Contributor) & Sanderson, M. J. (Contributor), ZENODO, Oct 27 2018
DOI: 10.5061/dryad.72c2g, https://zenodo.org/records/4971340
Dataset
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Additional file 5 of Exceptional lability of a genomic complex in rice and its close relatives revealed by interspecific and intraspecific comparison and population analysis
Tian, Z. (Contributor), Yu, Y. (Contributor), Lin, F. (Creator), Yu, Y. (Contributor), SanMiguel, P. J. (Creator), Wing, R. A. (Creator), McCouch, S. R. (Creator), Ma, J. (Contributor) & Jackson, S. A. (Creator), figshare, 2020
DOI: 10.6084/m9.figshare.12879035.v1, https://springernature.figshare.com/articles/presentation/Additional_file_5_of_Exceptional_lability_of_a_genomic_complex_in_rice_and_its_close_relatives_revealed_by_interspecific_and_intraspecific_comparison_and_population_analysis/12879035/1
Dataset
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Additional file 8 of Gene fusion as an important mechanism to generate new genes in the genus Oryza
Zhou, Y. (Creator), Zhang, C. (Creator), Zhang, L. (Creator), Ye, Q. (Creator), Liu, N. (Creator), Wang, M. (Creator), Long, G. (Creator), Fan, W. (Creator), Long, M. (Creator) & Wing, R. A. (Creator), figshare, 2022
DOI: 10.6084/m9.figshare.20081177, https://springernature.figshare.com/articles/dataset/Additional_file_8_of_Gene_fusion_as_an_important_mechanism_to_generate_new_genes_in_the_genus_Oryza/20081177
Dataset
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Additional file 5: Table S4. of The impact and origin of copy number variations in the Oryza species
Bai, Z. (Contributor), Chen, J. (Contributor), Liao, Y. (Creator), Wang, M. (Contributor), Liu, R. (Creator), Ge, S. (Creator), Wing, R. A. (Creator) & Chen, M. (Contributor), figshare, 2016
DOI: 10.6084/m9.figshare.c.3597560_d7.v1, https://springernature.figshare.com/articles/dataset/Additional_file_5_Table_S4_of_The_impact_and_origin_of_copy_number_variations_in_the_Oryza_species/4322591/1
Dataset
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Additional file 7 of Gene fusion as an important mechanism to generate new genes in the genus Oryza
Zhou, Y. (Creator), Zhang, C. (Creator), Zhang, L. (Creator), Ye, Q. (Creator), Liu, N. (Creator), Wang, M. (Creator), Long, G. (Creator), Fan, W. (Creator), Long, M. (Creator) & Wing, R. A. (Creator), figshare, 2022
DOI: 10.6084/m9.figshare.20081174, https://springernature.figshare.com/articles/dataset/Additional_file_7_of_Gene_fusion_as_an_important_mechanism_to_generate_new_genes_in_the_genus_Oryza/20081174
Dataset
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Additional file 2: Table S2. of The impact and origin of copy number variations in the Oryza species
Bai, Z. (Contributor), Chen, J. (Contributor), Liao, Y. (Creator), Wang, M. (Contributor), Liu, R. (Creator), Ge, S. (Creator), Wing, R. A. (Creator) & Chen, M. (Contributor), figshare, 2016
DOI: 10.6084/m9.figshare.c.3597560_d4.v1, https://springernature.figshare.com/articles/dataset/Additional_file_2_Table_S2_of_The_impact_and_origin_of_copy_number_variations_in_the_Oryza_species/4322531/1
Dataset
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Additional file 2: Table S2. of The impact and origin of copy number variations in the Oryza species
Bai, Z. (Contributor), Chen, J. (Contributor), Liao, Y. (Creator), Wang, M. (Contributor), Liu, R. (Creator), Ge, S. (Creator), Wing, R. A. (Creator) & Chen, M. (Contributor), figshare, 2016
DOI: 10.6084/m9.figshare.c.3597560_d4, https://springernature.figshare.com/articles/dataset/Additional_file_2_Table_S2_of_The_impact_and_origin_of_copy_number_variations_in_the_Oryza_species/4322531
Dataset
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Additional file 4: Figure S1. of The impact and origin of copy number variations in the Oryza species
Bai, Z. (Contributor), Chen, J. (Contributor), Liao, Y. (Creator), Wang, M. (Contributor), Liu, R. (Creator), Ge, S. (Creator), Wing, R. A. (Creator) & Chen, M. (Contributor), figshare, 2016
DOI: 10.6084/m9.figshare.c.3597560_d1.v1, https://springernature.figshare.com/articles/figure/Additional_file_4_Figure_S1_of_The_impact_and_origin_of_copy_number_variations_in_the_Oryza_species/4322474/1
Dataset
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Additional file 6: Table S5. of The impact and origin of copy number variations in the Oryza species
Bai, Z. (Contributor), Chen, J. (Contributor), Liao, Y. (Creator), Wang, M. (Contributor), Liu, R. (Creator), Ge, S. (Creator), Wing, R. A. (Creator) & Chen, M. (Contributor), figshare, 2016
DOI: 10.6084/m9.figshare.c.3597560_d9.v1, https://springernature.figshare.com/articles/dataset/Additional_file_6_Table_S5_of_The_impact_and_origin_of_copy_number_variations_in_the_Oryza_species/4322612/1
Dataset
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Gene fusion as an important mechanism to generate new genes in the genus Oryza
Zhou, Y. (Creator), Zhang, C. (Creator), Zhang, L. (Creator), Ye, Q. (Creator), Liu, N. (Creator), Wang, M. (Creator), Long, G. (Creator), Fan, W. (Creator), Long, M. (Creator) & Wing, R. A. (Creator), figshare, 2022
DOI: 10.6084/m9.figshare.c.6049844.v1, https://springernature.figshare.com/collections/Gene_fusion_as_an_important_mechanism_to_generate_new_genes_in_the_genus_Oryza/6049844/1
Dataset
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Additional file 9 of Gene fusion as an important mechanism to generate new genes in the genus Oryza
Zhou, Y. (Creator), Zhang, C. (Creator), Zhang, L. (Creator), Ye, Q. (Creator), Liu, N. (Creator), Wang, M. (Creator), Long, G. (Creator), Fan, W. (Creator), Long, M. (Creator) & Wing, R. A. (Creator), figshare, 2022
DOI: 10.6084/m9.figshare.20081180.v1, https://springernature.figshare.com/articles/dataset/Additional_file_9_of_Gene_fusion_as_an_important_mechanism_to_generate_new_genes_in_the_genus_Oryza/20081180/1
Dataset
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Oryza Sativa and Magnaporthe Grisea LongSAGE
Gowda, M. (Contributor), Li, H. (Contributor), Jantasuriyarat, C. (Contributor), Chen, S. (Contributor), Bellizzi, M. (Contributor), Pampanwar, V. (Contributor), Kim, H. (Contributor), Stahlberg, E. (Contributor), Wing, R. (Contributor) & Soderlund, C. (Contributor), ArrayExpress, 2004
https://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-1924
Dataset
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MOESM3 of Genome sequence of the model rice variety KitaakeX
Jain, R. (Creator), Jenkins, J. (Creator), Shu, S. (Contributor), Chern, M. (Contributor), Martin, J. A. (Creator), Copetti, D. (Creator), Duong, P. Q. (Creator), Pham, N. T. (Creator), Kudrna, D. A. (Creator), Talag, J. (Creator), Schackwitz, W. S. (Creator), Lipzen, A. M. (Creator), Dilworth, D. (Creator), Bauer, D. (Creator), Grimwood, J. (Creator), Nelson, C. R. (Creator), Xing, F. (Creator), Xie, W. (Contributor), Barry, K. W. (Creator), Wing, R. A. (Creator), Schmutz, J. (Creator), Li, G. (Contributor) & Ronald, P. C. (Creator), figshare, 2019
DOI: 10.6084/m9.figshare.11293541.v1, https://springernature.figshare.com/articles/MOESM3_of_Genome_sequence_of_the_model_rice_variety_KitaakeX/11293541/1
Dataset