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Fiona M McCarthy

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1994 …2025

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  • Normative aging results in degradation of gene networks in a zebra finch basal ganglia nucleus dedicated to vocal behavior

    Higgins, C. M., Vishwanath, S. H., McCarthy, F. M., Gordon, M. L., Peter, B. & Miller, J. E., May 2025, In: Neurobiology of Aging. 149, p. 19-33 15 p.

    Research output: Contribution to journal › Article › peer-review

  • Comparative proteomic analysis of tail regeneration in the green anole lizard, Anolis carolinensis

    Xu, C., Hutchins, E. D., Eckalbar, W., Pendarvis, K., Benson, D. M., Lake, D. F., McCarthy, F. M. & Kusumi, K., Jan 2024, In: Natural Sciences. 4, 1, e20210421.

    Research output: Contribution to journal › Article › peer-review

    Open Access

  • Current challenges and future of agricultural genomes to phenomes in the USA

    Tuggle, C. K., Clarke, J. L., Murdoch, B. M., Lyons, E., Scott, N. M., Beneš, B., Campbell, J. D., Chung, H., Daigle, C. L., Das Choudhury, S., Dekkers, J. C. M., Dórea, J. R. R., Ertl, D. S., Feldman, M., Fragomeni, B. O., Fulton, J. E., Guadagno, C. R., Hagen, D. E., Hess, A. S. & Kramer, L. M. & 14 others, Lawrence-Dill, C. J., Lipka, A. E., Lübberstedt, T., McCarthy, F. M., McKay, S. D., Murray, S. C., Riggs, P. K., Rowan, T. N., Sheehan, M. J., Steibel, J. P., Thompson, A. M., Thornton, K. J., Van Tassell, C. P. & Schnable, P. S., Dec 2024, In: Genome biology. 25, 1, 8.

    Research output: Contribution to journal › Letter › peer-review

    Open Access
    9 Scopus citations

  • Immunoglobulin-like receptors in chickens: identification, functional characterization, and renaming to cluster homolog of immunoglobulin-like receptors

    Sparling, B. A., Ng, T. T., Carlo-Allende, A., McCarthy, F. M., Taylor, R. L. & Drechsler, Y., Feb 2024, In: Poultry science. 103, 2, 103292.

    Research output: Contribution to journal › Article › peer-review

    Open Access
    2 Scopus citations

  • Fourth Report on Chicken Genes and Chromosomes 2022

    Smith, J., Alfieri, J. M., Anthony, N., Arensburger, P., Athrey, G. N., Balacco, J., Balic, A., Bardou, P., Barela, P., Bigot, Y., Blackmon, H., Borodin, P. M., Carroll, R., Casono, M. C., Charles, M., Cheng, H., Chiodi, M., Cigan, L., Coghill, L. M. & Crooijmans, R. & 104 others, Das, N., Davey, S., Davidian, A., Degalez, F., Dekkers, J. M., Derks, M., Diack, A. B., Djikeng, A., Drechsler, Y., Dyomin, A., Fedrigo, O., Fiddaman, S. R., Formenti, G., Frantz, L. A. F., Fulton, J. E., Gaginskaya, E., Galkina, S., Gallardo, R. A., Geibel, J., Gheyas, A. A., Godinez, C. J. P., Goodell, A., Graves, J. A. M., Griffin, D. K., Haase, B., Han, J. L., Hanotte, O., Henderson, L. J., Hou, Z. C., Howe, K., Huynh, L., Ilatsia, E., Jarvis, E. D., Johnson, S. M., Kaufman, J., Kelly, T., Kemp, S., Kern, C., Keroack, J. H., Klopp, C., Lagarrigue, S., Lamont, S. J., Lange, M., Lanke, A., Larkin, D. M., Larson, G., Layos, J. K. N., Lebrasseur, O., Malinovskaya, L. P., Martin, R. J., Cerezo, M. L. M., Mason, A. S., McCarthy, F. M., McGrew, M. J., Mountcastle, J., Muhonja, C. K., Muir, W., Muret, K., Murphy, T. D., Ng'ang'a, I., Nishibori, M., O'Connor, R. E., Ogugo, M., Okimoto, R., Ouko, O., Patel, H. R., Perini, F., Pigozzi, M. I., Potter, K. C., Price, P. D., Reimer, C., Rice, E. S., Rocos, N., Rogers, T. F., Saelao, P., Schauer, J., Schnabel, R. D., Schneider, V. A., Simianer, H., Smith, A., Stevens, M. P., Stiers, K., Tiambo, C. K., Tixier-Boichard, M., Torgasheva, A. A., Tracey, A., Tregaskes, C. A., Vervelde, L., Wang, Y., Warren, W. C., Waters, P. D., Webb, D., Weigend, S., Wolc, A., Wright, A. E., Wright, D., Wu, Z., Yamagata, M., Yang, C., Yin, Z. T., Young, M. C., Zhang, G., Zhao, B. & Zhou, H., Jul 1 2023, In: Cytogenetic and Genome Research. 162, 8-9, p. 405-528 124 p.

    Research output: Contribution to journal › Review article › peer-review

    22 Scopus citations
View all 85 Research outputs

  • Data from: Cross-ontology multi-level association rule mining in the Gene Ontology

    Manda, P. (Creator), Ozkan, S. (Creator), Wang, H. (Creator), McCarthy, F. (Creator) & Bridges, S. M. (Creator), Dryad, Feb 22 2013

    DOI: 10.5061/dryad.nr353, https://datadryad.org/dataset/doi:10.5061/dryad.nr353

    Dataset

  • The genome of the American aligator (Alligator mississippiensis)

    Green, R. E. (Creator), Braun, E. L. (Creator), Armstrong, J. (Creator), Earl, D. (Creator), Nguyen, N. (Creator), Hickey, G. (Creator), Vandewege, M. W. (Creator), St John, J. A. (Creator), Capella-Gutiérrez, S. (Creator), Castoe, T. A. (Creator), Kern, C. (Creator), Fujita, M. K. (Creator), Opazo, J. C. (Creator), Jurka, J. (Creator), Kojima, K. K. (Creator), Caballero, J. (Creator), Hubley, R. M. (Creator), Smit, A. F. (Creator), Platt, R. N. (Creator), Lavoie, C. A. (Creator), Ramakodi, M. P. (Creator), Suh, A. (Creator), Miles, L. (Creator), Chong, A. Y. (Creator), Jaratlerdsiri, W. (Creator), Gongora, J. (Creator), Moran, C. (Creator), Iriarte, A. (Creator), McCormack, J. (Creator), Burgess, S. C. (Creator), Edwards, S. V. (Creator), Lyons, E. (Creator), Williams, C. (Creator), Breen, M. (Creator), Howard, J. T. (Creator), Gresham, C. R. (Creator), Peterson, D. G. (Creator), Schmitz, J. (Creator), Pollock, D. D. (Creator), Haussler, D. (Creator), Triplett, E. W. (Creator), Zhang, G. (Creator), Irie, N. (Creator), Jarvis, E. D. (Creator), Brochu, C. A. (Creator), Schmidt, C. J. (Creator), McCarthy, F. M. (Creator), Faircloth, B. C. (Creator), Hoffmann, F. G. (Creator), Glenn, T. C. (Creator), Gabaldón, T. (Creator), Paten, B. (Creator), Ray, D. A. (Creator), Haussler, D. (Creator), Gabaldón, T. (Creator) & Paten, B. (Creator), GigaScience Database, Oct 21 2014

    DOI: 10.5524/100126, http://gigadb.org/dataset/100126

    Dataset

  • The genome of the saltwater crocodile (Crocodylus porosus)

    Green, R. E. (Creator), Braun, E. L. (Creator), Armstrong, J. (Creator), Earl, D. (Creator), Nguyen, N. (Creator), Hickey, G. (Creator), Vandewege, M. W. (Creator), St John, J. A. (Creator), Capella-Gutiérrez, S. (Creator), Castoe, T. A. (Creator), Kern, C. (Creator), Fujita, M. K. (Creator), Opazo, J. C. (Creator), Jurka, J. (Creator), Kojima, K. K. (Creator), Caballero, J. (Creator), Hubley, R. M. (Creator), Smit, A. F. (Creator), Platt, R. N. (Creator), Lavoie, C. A. (Creator), Ramakodi, M. P. (Creator), Suh, A. (Creator), Miles, L. (Creator), Chong, A. Y. (Creator), Jaratlerdsiri, W. (Creator), Gongora, J. (Creator), Moran, C. (Creator), Iriarte, A. (Creator), McCormack, J. (Creator), Burgess, S. C. (Creator), Edwards, S. V. (Creator), Lyons, E. (Creator), Williams, C. (Creator), Breen, M. (Creator), Howard, J. T. (Creator), Gresham, C. R. (Creator), Peterson, D. G. (Creator), Schmitz, J. (Creator), Pollock, D. D. (Creator), Haussler, D. (Creator), Triplett, E. W. (Creator), Zhang, G. (Creator), Irie, N. (Creator), Jarvis, E. D. (Creator), Brochu, C. A. (Creator), Schmidt, C. J. (Creator), McCarthy, F. M. (Creator), Faircloth, B. C. (Creator), Hoffmann, F. G. (Creator), Glenn, T. C. (Creator), Gabaldón, T. (Creator), Paten, B. (Creator) & Ray, D. A. (Creator), GigaScience Database, Oct 21 2014

    DOI: 10.5524/100127, http://gigadb.org/dataset/100127

    Dataset

  • Current challenges and future of agricultural genomes to phenomes in the USA

    Schnable, P. S. (Creator), Tuggle, C. K. (Creator), Guadagno, C. R. (Creator), das Choudhury, S. (Contributor), Lubberstedt, T. T. (Contributor), Dorea, J. R. R. (Contributor), Lipka, A. E. (Creator), Thornton, K. J. (Creator), Lyons, E. H. (Creator), Daigle, C. L. (Creator), Scott, N. M. (Creator), Fulton, J. E. (Creator), Clarke, J. L. (Creator), Campbell, J. D. (Creator), Chung, H. C. (Creator), Rowan, T. N. (Creator), McCarthy, F. M. (Creator), Van Tassell, C. P. (Creator), Thompson, A. M. (Creator), Murray, S. C. (Creator), Mckay, S. D. (Contributor), Lawrence-Dill, C. J. (Creator), Sheehan, M. J. (Creator), Dekkers, J. C. M. (Creator), Riggs, P. K. (Creator), Murdoch, B. M. (Creator), Steibel, J. P. (Creator), Kramer, L. M. (Creator), Hagen, D. E. (Creator), Benes, B. (Contributor), Ertl, D. S. (Creator), Fragomeni, B. D. O. (Creator) & Hess, A. S. (Creator), figshare, 2024

    DOI: 10.6084/m9.figshare.c.7007210.v1, https://springernature.figshare.com/collections/Current_challenges_and_future_of_agricultural_genomes_to_phenomes_in_the_USA/7007210/1

    Dataset

  • The genome of the Indian gharial (Gavialis gangeticus)

    Green, R. E. (Creator), Braun, E. L. (Creator), Armstrong, J. (Creator), Earl, D. (Creator), Nguyen, N. (Creator), Hickey, G. (Creator), Vandewege, M. W. (Creator), St John, J. A. (Creator), Capella-Gutiérrez, S. (Creator), Castoe, T. A. (Creator), Kern, C. (Creator), Fujita, M. K. (Creator), Opazo, J. C. (Creator), Jurka, J. (Creator), Kojima, K. K. (Creator), Caballero, J. (Creator), Hubley, R. M. (Creator), Smit, A. F. (Creator), Platt, R. N. (Creator), Lavoie, C. A. (Creator), Ramakodi, M. P. (Creator), Suh, A. (Creator), Miles, L. (Creator), Chong, A. Y. (Creator), Jaratlerdsiri, W. (Creator), Gongora, J. (Creator), Moran, C. (Creator), Iriarte, A. (Creator), McCormack, J. (Creator), Burgess, S. C. (Creator), Edwards, S. V. (Creator), Lyons, E. (Creator), Williams, C. (Creator), Breen, M. (Creator), Howard, J. T. (Creator), Gresham, C. R. (Creator), Peterson, D. G. (Creator), Schmitz, J. (Creator), Pollock, D. D. (Creator), Haussler, D. (Creator), Triplett, E. W. (Creator), Zhang, G. (Creator), Irie, N. (Creator), Jarvis, E. D. (Creator), Brochu, C. A. (Creator), Schmidt, C. J. (Creator), McCarthy, F. M. (Creator), Faircloth, B. C. (Creator), Hoffmann, F. G. (Creator), Glenn, T. C. (Creator), Gabaldón, T. (Creator), Paten, B. (Creator) & Ray, D. A. (Creator), GigaScience Database, Oct 21 2014

    DOI: 10.5524/100128, http://gigadb.org/dataset/100128

    Dataset

View all 22 datasets