Plant Sciences, School of

Search results

• Structural Studies of Bacteriophage alpha3 Assembly, X-Ray Crystallography

  Bernal, R. A. (Contributor), Hafenstein, S. (Contributor), Olson, N. H. (Contributor), Bowman, V. D. (Contributor), Chipman, P. R. (Contributor), Baker, T. S. (Contributor), Fane, B. A. (Contributor) & Rossmann, M. G. (Contributor), Protein Data Bank (PDB), Dec 25 2002

  DOI: 10.2210/pdb1M06/pdb, https://www.wwpdb.org/pdb?id=pdb_00001m06

  Dataset

• 4JPP : Bacteriophage phiX174 H protein residues 143-282

  Fane, B. A. (Contributor), Sun, L. (Contributor), Young, L. N. (Contributor), Zhang, X. (Contributor), Boudko, S. P. (Contributor), Fokine, A. (Contributor) & Rossmann, M. G. (Contributor), RCSB-PDB, 2013

  DOI: 10.2210/pdb4jpp/pdb, https://www.rcsb.org/structure/4JPP

  Dataset

• Data from: Machine learning-based differential network analysis: a study of stress-responsive transcriptomes in Arabidopsis thaliana

  Ma, C. (Creator), Xin, M. (Creator), Feldmann, K. A. (Creator) & Wang, X. (Creator), Dryad, Jan 7 2015

  DOI: 10.5061/dryad.41b9g, https://datadryad.org/stash/dataset/doi:10.5061/dryad.41b9g

  Dataset

• A willow sex chromosome reveals convergent evolution of complex palindromic repeats

  Zhou, R. (Creator), Macaya-Sanz, D. (Creator), Carlson, C. H. (Creator), Schmutz, J. (Creator), Jenkins, J. W. (Creator), Kudrna, D. (Creator), Sharma, A. (Creator), Sandor, L. (Creator), Shu, S. (Contributor), Barry, K. (Creator), Tuskan, G. A. (Creator), Ma, T. (Creator), Liu, J. (Contributor), Olson, M. (Creator), Smart, L. B. (Creator), Difazio, S. P. (Contributor), Schmutz, J. (Creator), Kudrna, D. (Creator) & Shengqiang, S. (Contributor), figshare, 2020

  DOI: 10.6084/m9.figshare.c.4858245.v1, https://springernature.figshare.com/collections/A_willow_sex_chromosome_reveals_convergent_evolution_of_complex_palindromic_repeats/4858245/1

  Dataset

• Additional file 1 of A willow sex chromosome reveals convergent evolution of complex palindromic repeats

  Zhou, R. (Creator), Macaya-Sanz, D. (Creator), Carlson, C. H. (Creator), Schmutz, J. (Creator), Jenkins, J. W. (Creator), Kudrna, D. (Creator), Sharma, A. (Creator), Sandor, L. (Creator), Shu, S. (Contributor), Barry, K. (Creator), Tuskan, G. A. (Creator), Ma, T. (Creator), Liu, J. (Contributor), Olson, M. (Creator), Smart, L. B. (Creator), Difazio, S. P. (Contributor), Schmutz, J. (Creator), Kudrna, D. (Creator) & Shengqiang, S. (Contributor), figshare, 2020

  DOI: 10.6084/m9.figshare.11859030, https://springernature.figshare.com/articles/Additional_file_1_of_A_willow_sex_chromosome_reveals_convergent_evolution_of_complex_palindromic_repeats/11859030

  Dataset

• Additional file 2 of The core autophagy machinery is not required for chloroplast singlet oxygen-mediated cell death in the Arabidopsis thaliana plastid ferrochelatase two mutant

  Lemke, M. D. (Creator), Fisher, K. E. (Creator), Kozlowska, M. A. (Creator), Tano, D. W. (Creator) & Woodson, J. D. (Creator), figshare, 2021

  DOI: 10.6084/m9.figshare.15020759.v1, https://springernature.figshare.com/articles/dataset/Additional_file_2_of_The_core_autophagy_machinery_is_not_required_for_chloroplast_singlet_oxygen-mediated_cell_death_in_the_Arabidopsis_thaliana_plastid_ferrochelatase_two_mutant/15020759/1

  Dataset

• Gene Expression between two cell layers in maize shoot apical meristem

  Ware, D. (Contributor), Wei, F. (Contributor), Pasternak, S. (Contributor), Liang, C. (Contributor), Zhang, J. (Contributor), Fulton, L. (Contributor), Minx, P. (Contributor), Courtney, L. (Contributor), Tomlinson, C. (Contributor), Strong, C. (Contributor), Delehaunty, K. (Contributor), Fronick, C. (Contributor), Courtney, B. (Contributor), Belter, E. (Contributor), Du, F. (Contributor), Kim, K. (Contributor), Cotton, M. (Contributor), Levy, A. (Contributor), Marchetto, P. (Contributor), Ochoa, K. (Contributor), Gillam, B. (Contributor), Chen, W. (Contributor), Yan, L. (Contributor), Higginbotham, J. (Contributor), Cardenas, M. (Contributor), Waligorski, J. (Contributor), Applebaum, E. (Contributor), Phelps, L. (Contributor), Falcone, J. (Contributor), Kanchi, K. (Contributor), Thane, T. (Contributor), Scimone, A. (Contributor), Thane, N. (Contributor), Henke, J. (Contributor), Wang, T. (Contributor), Ruppert, J. (Contributor), Shah, N. (Contributor), Rotter, K. (Contributor), Hodges, J. (Contributor), Ingenthron, E. (Contributor), Cordes, M. (Contributor), Kohlberg, S. (Contributor), Sgro, J. (Contributor), Delgado, B. (Contributor), Mead, K. (Contributor), Chinwalla, A. (Contributor), Leonard, S. (Contributor), Crouse, K. (Contributor), Collura, K. (Contributor), Kudrna, D. (Contributor), Currie, J. (Contributor), He, R. (Contributor), Angelova, A. (Contributor), Rajasekar, S. (Contributor), Mueller, T. (Contributor), Lomeli, R. (Contributor), Scara, G. (Contributor), Ko, A. (Contributor), Delaney, K. (Contributor), Wissotski, M. (Contributor), Lopez, G. (Contributor), Campos, D. (Contributor), Braidotti, M. (Contributor), Ashley, E. (Contributor), Golser, W. (Contributor), Kim, H. (Contributor), Lee, S. (Contributor), Lin, J. (Contributor), Dujmic, Z. (Contributor), Kim, W. (Contributor), Talag, J. (Contributor), Zuccolo, A. (Contributor), Fan, C. (Contributor), Sebastian, A. (Contributor), Kramer, M. (Contributor), Spiegel, L. (Contributor), Nascimento, L. (Contributor), Zutavern, T. (Contributor), Miller, B. (Contributor), Ambroise, C. (Contributor), Muller, S. (Contributor), Spooner, W. (Contributor), Narechania, A. (Contributor), Ren, L. (Contributor), Wei, S. (Contributor), Kumari, S. (Contributor), Faga, B. (Contributor), McMahan, L. (Contributor), Van Buren, P. (Contributor), Ying, K. (Contributor), Jia, Y. (Contributor), Kalyanaraman, A. (Contributor), Chaparro, C. (Contributor), Fu, Y. (Contributor), Han, Y. (Contributor), Lee, H. (Contributor), Li, P. (Contributor), Liu, S. (Contributor), Liu, Z. (Contributor), Sanmiguel, P. (Contributor), Nettleton, D. (Contributor), Nguyen, J. (Contributor), Ponnala, L. (Contributor), Sharma, A. (Contributor), Soderlund, C. (Contributor), Sun, Q. (Contributor), Wang, H. (Contributor), Waterman, M. (Contributor), Westerman, R. (Contributor), Yang, L. (Contributor), Yu, Y. (Contributor), Zhang, L. (Contributor), Zhou, S. (Contributor), Zhu, Q. (Contributor), Jiang, J. (Contributor), Jiang, N. (Contributor) & Aluru, S. (Contributor), ArrayExpress, 2013

  https://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-16868

  Dataset

• 1M06 : Structural Studies of Bacteriophage alpha3 Assembly, X-Ray Crystallography

  Bernal, R. A. (Contributor), Hafenstein, S. (Contributor), Olson, N. H. (Contributor), Bowman, V. D. (Contributor), Chipman, P. R. (Contributor), Baker, T. S. (Contributor), Fane, B. A. (Contributor) & Rossmann, M. G. (Contributor), RCSB-PDB, 2002

  DOI: 10.2210/pdb1m06/pdb, https://www.rcsb.org/structure/1M06

  Dataset

• 4JPN : Bacteriophage phiX174 H protein residues 143-221

  Sun, L. (Contributor), Young, L. N. (Contributor), Zhang, X. (Contributor), Boudko, S. P. (Contributor), Fokine, A. (Contributor), Rossmann, M. G. (Contributor) & Fane, B. A. (Contributor), RCSB-PDB, 2013

  DOI: 10.2210/pdb4jpn/pdb, https://www.rcsb.org/structure/4JPN

  Dataset

• Bacteriophage phiX174 H protein residues 143-282

  Sun, L. (Contributor), Young, L. N. (Contributor), Zhang, X. (Contributor), Boudko, S. P. (Contributor), Fokine, A. (Contributor), Zbornik, E. (Contributor), Roznowski, A. P. (Contributor), Molineux, I. J. (Contributor), Rossmann, M. G. (Contributor) & Fane, B. A. (Contributor), Protein Data Bank (PDB), Dec 11 2013

  DOI: 10.2210/pdb4JPP/pdb, https://www.wwpdb.org/pdb?id=pdb_00004jpp

  Dataset

• The phiX174 DNA binding protein J in two different capsid environments.

  Bernal, R. A. (Contributor), Hafenstein, S. (Contributor), Esmeralda, R. (Contributor), Fane, B. A. (Contributor) & Rossmann, M. G. (Contributor), Protein Data Bank (PDB), Apr 13 2004

  DOI: 10.2210/pdb1RB8/pdb, https://www.wwpdb.org/pdb?id=pdb_00001rb8

  Dataset

• MOESM11 of Transcriptome analysis reveals key genes involved in the regulation of nicotine biosynthesis at early time points after topping in tobacco (Nicotiana tabacum L.)

  Qin, Y. (Creator), Bai, S. (Creator), Li, W. (Creator), Sun, T. (Creator), Galbraith, D. W. (Creator), Yang, Z. (Creator), Zhou, Y. (Creator), Sun, G. (Creator), Wang, B. (Creator), Zefeng, Y. (Contributor) & Bingwu, W. (Contributor), figshare, 2020

  DOI: 10.6084/m9.figshare.11665233, https://springernature.figshare.com/articles/dataset/MOESM11_of_Transcriptome_analysis_reveals_key_genes_involved_in_the_regulation_of_nicotine_biosynthesis_at_early_time_points_after_topping_in_tobacco_Nicotiana_tabacum_L_/11665233

  Dataset

• Transcription profiling by high throughput sequencing of whole kernels at 0, 3, and 5 days after pollination and endosperms at 7, 10, and 15 days after pollination, using maize B73 x Mo17 reciprocal crosses

  Xin, M. (Contributor), Yang, R. (Contributor), Li, G. (Contributor), Chen, H. (Contributor), Laurie, J. (Contributor), Ma, C. (Contributor), Wang, D. (Contributor), Yao, Y. (Contributor), Sun, Q. (Contributor), Yadegari, R. (Contributor), Wang, X. (Contributor) & Ni, Z. (Contributor), ArrayExpress, 2013

  https://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-48425

  Dataset

• Additional file 3 of AtPIG-S, a predicted Glycosylphosphatidylinositol Transamidase subunit, is critical for pollen tube growth in Arabidopsis

  Desnoyer, N. (Creator), Howard, G. (Creator), Jong, E. (Creator) & Palanivelu, R. (Creator), figshare, 2020

  DOI: 10.6084/m9.figshare.12825335, https://springernature.figshare.com/articles/Additional_file_3_of_AtPIG-S_a_predicted_Glycosylphosphatidylinositol_Transamidase_subunit_is_critical_for_pollen_tube_growth_in_Arabidopsis/12825335

  Dataset

• Transcriptome analysis reveals key genes involved in the regulation of nicotine biosynthesis at early time points after topping in tobacco (Nicotiana tabacum L.)

  Qin, Y. (Creator), Bai, S. (Creator), Li, W. (Creator), Sun, T. (Creator), Galbraith, D. W. (Creator), Yang, Z. (Creator), Zhou, Y. (Creator), Sun, G. (Creator) & Wang, B. (Creator), figshare, 2020

  DOI: 10.6084/m9.figshare.c.4823928.v1, https://springernature.figshare.com/collections/Transcriptome_analysis_reveals_key_genes_involved_in_the_regulation_of_nicotine_biosynthesis_at_early_time_points_after_topping_in_tobacco_Nicotiana_tabacum_L_/4823928/1

  Dataset

• MOESM7 of Transcriptome analysis reveals key genes involved in the regulation of nicotine biosynthesis at early time points after topping in tobacco (Nicotiana tabacum L.)

  Qin, Y. (Creator), Bai, S. (Creator), Li, W. (Creator), Sun, T. (Creator), Galbraith, D. W. (Creator), Yang, Z. (Creator), Zhou, Y. (Creator), Sun, G. (Creator), Wang, B. (Creator), Zefeng, Y. (Contributor) & Bingwu, W. (Contributor), figshare, 2020

  DOI: 10.6084/m9.figshare.11665293, https://springernature.figshare.com/articles/dataset/MOESM7_of_Transcriptome_analysis_reveals_key_genes_involved_in_the_regulation_of_nicotine_biosynthesis_at_early_time_points_after_topping_in_tobacco_Nicotiana_tabacum_L_/11665293

  Dataset

• Additional file 1 of AtPIG-S, a predicted Glycosylphosphatidylinositol Transamidase subunit, is critical for pollen tube growth in Arabidopsis

  Desnoyer, N. (Creator), Howard, G. (Creator), Jong, E. (Creator) & Palanivelu, R. (Creator), figshare, 2020

  DOI: 10.6084/m9.figshare.12825329, https://springernature.figshare.com/articles/Additional_file_1_of_AtPIG-S_a_predicted_Glycosylphosphatidylinositol_Transamidase_subunit_is_critical_for_pollen_tube_growth_in_Arabidopsis/12825329

  Dataset

• MOESM9 of Transcriptome analysis reveals key genes involved in the regulation of nicotine biosynthesis at early time points after topping in tobacco (Nicotiana tabacum L.)

  Qin, Y. (Creator), Bai, S. (Creator), Li, W. (Creator), Sun, T. (Creator), Galbraith, D. W. (Creator), Yang, Z. (Creator), Zhou, Y. (Creator), Sun, G. (Creator), Wang, B. (Creator), Zefeng, Y. (Contributor) & Bingwu, W. (Contributor), figshare, 2020

  DOI: 10.6084/m9.figshare.11665311, https://springernature.figshare.com/articles/dataset/MOESM9_of_Transcriptome_analysis_reveals_key_genes_involved_in_the_regulation_of_nicotine_biosynthesis_at_early_time_points_after_topping_in_tobacco_Nicotiana_tabacum_L_/11665311

  Dataset

• Gene expression profiling of grape-bud response to two alternative dormancy-release stimuli

  Ophir, R. (Contributor), Pang, X. (Contributor), Halaly, T. (Contributor), Venkateswari, J. (Contributor), Lavee, S. (Contributor), Galbraith, D. (Contributor) & Or, E. (Contributor), ArrayExpress, 2010

  https://www.ebi.ac.uk/arrayexpress/experiments/E-GEOD-16173

  Dataset

• Appendix C. Methods for DNA extraction, PCR, sequencing, and sequence assembly.

  Arnold, A. E. (Contributor) & Lutzoni, F. (Contributor), figshare, 2016

  DOI: 10.6084/m9.figshare.3527351, https://wiley.figshare.com/articles/dataset/Appendix_C_Methods_for_DNA_extraction_PCR_sequencing_and_sequence_assembly_/3527351

  Dataset

• Data from: Global population structure of a worldwide pest and virus vector: genetic diversity and population history of the Bemisia tabaci sibling species group

  Hadjistylli, M. (Creator), Roderick, G. K. (Creator) & Brown, J. K. (Creator), Dryad, Oct 10 2017

  DOI: 10.5061/dryad.h7s57, https://datadryad.org/stash/dataset/doi:10.5061/dryad.h7s57

  Dataset

• Appendix E. Statistical tables for regression analyses regarding effects of latitude and annual rainfall on endophyte incidence and diversity.

  Arnold, A. E. (Contributor) & Lutzoni, F. (Contributor), figshare, 2016

  DOI: 10.6084/m9.figshare.3527345, https://wiley.figshare.com/articles/dataset/Appendix_E_Statistical_tables_for_regression_analyses_regarding_effects_of_latitude_and_annual_rainfall_on_endophyte_incidence_and_diversity_/3527345

  Dataset

• Appendix C. Methods for DNA extraction, PCR, sequencing, and sequence assembly.

  Arnold, A. E. (Contributor) & Lutzoni, F. (Contributor), Wiley, 2016

  DOI: 10.6084/m9.figshare.3527351.v1, https://wiley.figshare.com/articles/dataset/Appendix_C_Methods_for_DNA_extraction_PCR_sequencing_and_sequence_assembly_/3527351/1

  Dataset

• Additional file 19: of The draft genome of whitefly Bemisia tabaci MEAM1, a global crop pest, provides novel insights into virus transmission, host adaptation, and insecticide resistance

  Chen, W. (Contributor), Hasegawa, D. K. (Creator), Kaur, N. (Contributor), Kliot, A. (Creator), Pinheiro, P. V. (Creator), Luan, J. (Contributor), Stensmyr, M. C. (Creator), Zheng, Y. (Creator), Liu, W. (Contributor), Sun, H. (Contributor), Xu, Y. (Contributor), Luo, Y. (Creator), Kruse, A. (Creator), Yang, X. (Contributor), Kontsedalov, S. (Creator), Lebedev, G. (Creator), Fisher, T. W. (Creator), Nelson, D. R. (Creator), Hunter, W. B. (Creator), Brown, J. K. (Creator), Jander, G. (Creator), Cilia, M. (Creator), Douglas, A. E. (Creator), Ghanim, M. (Creator), Simmons, A. M. (Creator), Wintermantel, W. M. (Creator), Ling, K.-S. (Contributor) & Fei, Z. (Contributor), figshare, 2016

  DOI: 10.6084/m9.figshare.c.3634274_d13, https://springernature.figshare.com/articles/dataset/Additional_file_19_of_The_draft_genome_of_whitefly_Bemisia_tabaci_MEAM1_a_global_crop_pest_provides_novel_insights_into_virus_transmission_host_adaptation_and_insecticide_resistance/4434902

  Dataset

• Additional file 17: of The draft genome of whitefly Bemisia tabaci MEAM1, a global crop pest, provides novel insights into virus transmission, host adaptation, and insecticide resistance

  Chen, W. (Contributor), Hasegawa, D. K. (Creator), Kaur, N. (Contributor), Kliot, A. (Creator), Pinheiro, P. V. (Creator), Luan, J. (Contributor), Stensmyr, M. C. (Creator), Zheng, Y. (Creator), Liu, W. (Contributor), Sun, H. (Contributor), Xu, Y. (Contributor), Luo, Y. (Creator), Kruse, A. (Creator), Yang, X. (Contributor), Kontsedalov, S. (Creator), Lebedev, G. (Creator), Fisher, T. W. (Creator), Nelson, D. R. (Creator), Hunter, W. B. (Creator), Brown, J. K. (Creator), Jander, G. (Creator), Cilia, M. (Creator), Douglas, A. E. (Creator), Ghanim, M. (Creator), Simmons, A. M. (Creator), Wintermantel, W. M. (Creator), Ling, K.-S. (Contributor) & Fei, Z. (Contributor), figshare, 2016

  DOI: 10.6084/m9.figshare.c.3634274_d18, https://springernature.figshare.com/articles/dataset/Additional_file_17_of_The_draft_genome_of_whitefly_Bemisia_tabaci_MEAM1_a_global_crop_pest_provides_novel_insights_into_virus_transmission_host_adaptation_and_insecticide_resistance/4434920

  Dataset