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• SemEval-2021 Task 10: Source-Free Domain Adaptation for Semantic Processing

  Laparra, E. (Contributor), Su, X. (Contributor), Zhao, Y. (Contributor), Uzuner, Ö. (Contributor), Miller, T. A. (Contributor) & Bethard, S. (Contributor), ZENODO, Jul 24 2021

  DOI: 10.5281/zenodo.5132956, https://zenodo.org/record/5132956

  Dataset

• Figure 4 from: Endara L, Thessen A, Cole H, Walls R, Gkoutos G, Cao Y, Chong S, Cui H (2018) Modifier Ontologies for frequency, certainty, degree, and coverage phenotype modifier. Biodiversity Data Journal 6: e29232. https://doi.org/10.3897/BDJ.6.e29232

  Endara, L. (Contributor), Thessen, A. (Contributor), Cole, H. (Contributor), Walls, R. (Contributor), Gkoutos, G. (Contributor), Cao, Y. (Contributor), Chong, S. (Contributor) & Cui, H. (Contributor), ZENODO, Dec 6 2018

  DOI: 10.3897/BDJ.6.e29232.figure4, https://zenodo.org/record/1989871

  Dataset

• Additional file 2: of Introducing Explorer of Taxon Concepts with a case study on spider measurement matrix building

  Cui, H. (Creator), Xu, D. (Contributor), Chong, S. S. (Creator), Ramirez, M. (Creator), Rodenhausen, T. (Creator), Macklin, J. A. (Creator), Ludäscher, B. (Contributor), Morris, R. A. (Creator), Soto, E. M. (Creator) & Koch, N. M. (Contributor), figshare, 2016

  DOI: 10.6084/m9.figshare.c.3618818_d3.v1, https://springernature.figshare.com/articles/dataset/Additional_file_2_of_Introducing_Explorer_of_Taxon_Concepts_with_a_case_study_on_spider_measurement_matrix_building/4387214/1

  Dataset

• Additional file 3: of Introducing Explorer of Taxon Concepts with a case study on spider measurement matrix building

  Cui, H. (Creator), Xu, D. (Contributor), Chong, S. S. (Creator), Ramirez, M. (Creator), Rodenhausen, T. (Creator), Macklin, J. A. (Creator), Ludäscher, B. (Contributor), Morris, R. A. (Creator), Soto, E. M. (Creator) & Koch, N. M. (Contributor), figshare, 2016

  DOI: 10.6084/m9.figshare.c.3618818_d2.v1, https://springernature.figshare.com/articles/dataset/Additional_file_3_of_Introducing_Explorer_of_Taxon_Concepts_with_a_case_study_on_spider_measurement_matrix_building/4387190/1

  Dataset

• CUILESS2016: a clinical corpus applying compositional normalization of text mentions

  Osborne, J. D. (Contributor), Neu, M. B. (Creator), Danila, M. I. (Contributor), Solorio, T. (Creator) & Bethard, S. J. (Creator), figshare, 2018

  DOI: 10.6084/m9.figshare.c.3972579.v1, https://springernature.figshare.com/collections/CUILESS2016_a_clinical_corpus_applying_compositional_normalization_of_text_mentions/3972579/1

  Dataset

• Additional file 3: of Introducing Explorer of Taxon Concepts with a case study on spider measurement matrix building

  Cui, H. (Creator), Xu, D. (Contributor), Chong, S. S. (Creator), Ramirez, M. (Creator), Rodenhausen, T. (Creator), Macklin, J. A. (Creator), Ludäscher, B. (Contributor), Morris, R. A. (Creator), Soto, E. M. (Creator) & Koch, N. M. (Contributor), figshare, 2016

  DOI: 10.6084/m9.figshare.c.3618818_d2, https://springernature.figshare.com/articles/dataset/Additional_file_3_of_Introducing_Explorer_of_Taxon_Concepts_with_a_case_study_on_spider_measurement_matrix_building/4387190

  Dataset

• Additional file 1: of Introducing Explorer of Taxon Concepts with a case study on spider measurement matrix building

  Cui, H. (Creator), Xu, D. (Contributor), Chong, S. S. (Creator), Ramirez, M. (Creator), Rodenhausen, T. (Creator), Macklin, J. A. (Creator), Ludäscher, B. (Contributor), Morris, R. A. (Creator), Soto, E. M. (Creator) & Koch, N. M. (Contributor), figshare, 2016

  DOI: 10.6084/m9.figshare.c.3618818_d5.v1, https://springernature.figshare.com/articles/dataset/Additional_file_1_of_Introducing_Explorer_of_Taxon_Concepts_with_a_case_study_on_spider_measurement_matrix_building/4387277/1

  Dataset

• Introducing Explorer of Taxon Concepts with a case study on spider measurement matrix building

  Cui, H. (Creator), Xu, D. (Contributor), Chong, S. S. (Creator), Ramirez, M. (Creator), Rodenhausen, T. (Creator), Macklin, J. A. (Creator), Ludäscher, B. (Contributor), Morris, R. A. (Creator), Soto, E. M. (Creator) & Koch, N. M. (Contributor), figshare, 2016

  DOI: 10.6084/m9.figshare.c.3618818, https://figshare.com/collections/Introducing_Explorer_of_Taxon_Concepts_with_a_case_study_on_spider_measurement_matrix_building/3618818

  Dataset

• Adopting Maximum Pupil Diameter to Detect Subtle Usability Issues of a Smartphone Application, Conflict Solver

  Zhang, L. (Creator) & Cui, H. (Creator), Taylor & Francis, 2024

  DOI: 10.6084/m9.figshare.25547822, https://tandf.figshare.com/articles/dataset/Adopting_Maximum_Pupil_Diameter_to_Detect_Subtle_Usability_Issues_of_a_Smartphone_Application_Conflict_Solver/25547822

  Dataset

• Predicting Phenotype from Multi-Scale Genomic and Environment Data using Neural Networks and Knowledge Graphs

  Thessen, A. (Contributor), Appleby, G. (Contributor), Bartelme, R. (Contributor), Behrisch, M. (Contributor), Cooper, L. (Contributor), Heidorn, P. (Contributor), Jaiswal, P. (Contributor), LeBauer, D. (Contributor), Mosca, A. (Contributor), Munoz-Torres, M. (Contributor), Ross, A. (Contributor), Shefchek, K. (Contributor) & Swetnam, T. (Contributor), ZENODO, Aug 7 2020

  DOI: 10.5281/zenodo.3975829, https://zenodo.org/record/3975829

  Dataset

• TOADS for Computable Phenotypes

  Thessen, A. (Contributor), Ross, A. (Contributor), Heidorn, P. B. (Contributor) & Munoz-Torres, M. (Contributor), ZENODO, Jun 1 2019

  DOI: 10.5281/zenodo.3763710, https://zenodo.org/record/3763710

  Dataset

• Predicting Phenotype from Multi-Scale Genomic and Environment Data using Neural Networks and Knowledge Graphs: An Introduction to the NSF GenoPhenoEnvo Project

  Thessen, A. E. (Contributor), Behrisch, M. (Contributor), Heidorn, P. B. (Contributor), Jaiswal, P. (Contributor), LeBauer, D. (Contributor), Mosca, A. (Contributor), Munoz-Torres, M. C. (Contributor), Ross, A. (Contributor) & Swetnam, T. (Contributor), ZENODO, Jan 11 2020

  DOI: 10.5281/zenodo.4439518, https://zenodo.org/record/4439518

  Dataset

• Figure 1 from: Xu D, Chong S, Rodenhausen T, Cui H (2018) Resolving "orphaned" non-specific structures using machine learning and natural language processing methods. Biodiversity Data Journal 6: e26659. https://doi.org/10.3897/BDJ.6.e26659

  Xu, D. (Contributor), Chong, S. (Contributor), Rodenhausen, T. (Contributor) & Cui, H. (Contributor), ZENODO, Aug 10 2018

  DOI: 10.3897/BDJ.6.e26659.figure1, https://zenodo.org/record/3485200

  Dataset

• Introducing Explorer of Taxon Concepts with a case study on spider measurement matrix building

  Cui, H. (Creator), Xu, D. (Contributor), Chong, S. S. (Creator), Ramirez, M. (Creator), Rodenhausen, T. (Creator), Macklin, J. A. (Creator), Ludäscher, B. (Contributor), Morris, R. A. (Creator), Soto, E. M. (Creator) & Koch, N. M. (Contributor), figshare, 2016

  DOI: 10.6084/m9.figshare.c.3618818.v1, https://figshare.com/collections/Introducing_Explorer_of_Taxon_Concepts_with_a_case_study_on_spider_measurement_matrix_building/3618818/1

  Dataset

• Additional file 4: of Introducing Explorer of Taxon Concepts with a case study on spider measurement matrix building

  Cui, H. (Creator), Xu, D. (Contributor), Chong, S. S. (Creator), Ramirez, M. (Creator), Rodenhausen, T. (Creator), Macklin, J. A. (Creator), Ludäscher, B. (Contributor), Morris, R. A. (Creator), Soto, E. M. (Creator) & Koch, N. M. (Contributor), figshare, 2016

  DOI: 10.6084/m9.figshare.c.3618818_d1, https://springernature.figshare.com/articles/dataset/Additional_file_4_of_Introducing_Explorer_of_Taxon_Concepts_with_a_case_study_on_spider_measurement_matrix_building/4387151

  Dataset

• Additional file 4: of Introducing Explorer of Taxon Concepts with a case study on spider measurement matrix building

  Cui, H. (Creator), Xu, D. (Contributor), Chong, S. S. (Creator), Ramirez, M. (Creator), Rodenhausen, T. (Creator), Macklin, J. A. (Creator), Ludäscher, B. (Contributor), Morris, R. A. (Creator), Soto, E. M. (Creator) & Koch, N. M. (Contributor), figshare, 2016

  DOI: 10.6084/m9.figshare.c.3618818_d1.v1, https://springernature.figshare.com/articles/dataset/Additional_file_4_of_Introducing_Explorer_of_Taxon_Concepts_with_a_case_study_on_spider_measurement_matrix_building/4387151/1

  Dataset

• Which methods are the most effective to enable novice users to participate in FAIR ontology creation? A usability study

  Zhang, L. (Creator), Yang, X. (Creator) & Cui, H. (Creator), University of Arizona Research Data Repository, 2020

  DOI: 10.25422/azu.data.12642506.v1, https://arizona.figshare.com/articles/dataset/Which_methods_are_the_most_effective_to_enable_novice_users_to_participate_in_FAIR_ontology_creation_A_usability_study/12642506/1

  Dataset

• Adopting Maximum Pupil Diameter to Detect Subtle Usability Issues of a Smartphone Application, Conflict Solver

  Zhang, L. (Creator) & Cui, H. (Creator), Taylor & Francis, 2024

  DOI: 10.6084/m9.figshare.25547822.v1, https://tandf.figshare.com/articles/dataset/Adopting_Maximum_Pupil_Diameter_to_Detect_Subtle_Usability_Issues_of_a_Smartphone_Application_Conflict_Solver/25547822/1

  Dataset

• Which methods are the most effective to enable novice users to participate in FAIR ontology creation? A usability study

  Zhang, L. (Creator), Yang, X. (Creator) & Cui, H. (Creator), University of Arizona Research Data Repository, 2020

  DOI: 10.25422/azu.data.12642506, https://arizona.figshare.com/articles/dataset/Which_methods_are_the_most_effective_to_enable_novice_users_to_participate_in_FAIR_ontology_creation_A_usability_study/12642506

  Dataset

• Sustaining Software Preservation Efforts through Use and Communities of Practice

  McAllister, K. (Contributor) & Ruggill, J. (Contributor), ZENODO, Feb 18 2020

  DOI: 10.5281/zenodo.3673980, https://zenodo.org/record/3673980

  Dataset

• Lessons Learned from a Secondary Analysis Using Natural Language Processing and Machine Learning from a Lifestyle Intervention

  Freylersythe, S. (Creator), Sharp, R. (Creator), Culnan, J. (Creator), Romero Diaz, D. Y. (Creator), Bethard, S. J. (Creator) & Crane, T. E. (Creator), University of Arizona Research Data Repository, 2022

  DOI: 10.25422/azu.data.19576069.v1, https://arizona.figshare.com/articles/poster/Lessons_Learned_from_a_Secondary_Analysis_Using_Natural_Language_Processing_and_Machine_Learning_from_a_Lifestyle_Intervention/19576069/1

  Dataset

• Figure 1 from: Cui H, Macklin J, Sachs J, Reznicek A, Starr J, Ford B, Penev L, Chen H (2018) Incentivising use of structured language in biological descriptions: Author-driven phenotype data and ontology production. Biodiversity Data Journal 6: e29616. https://doi.org/10.3897/BDJ.6.e29616

  Cui, H. (Contributor), Macklin, J. (Contributor), Sachs, J. (Contributor), Reznicek, A. (Contributor), Starr, J. (Contributor), Ford, B. (Contributor), Penev, L. (Contributor) & Chen, H.-L. (Contributor), ZENODO, Nov 15 2018

  DOI: 10.3897/BDJ.6.e29616.figure1, https://zenodo.org/record/1488469

  Dataset

• Figure 2 from: Cui H, Macklin J, Sachs J, Reznicek A, Starr J, Ford B, Penev L, Chen H (2018) Incentivising use of structured language in biological descriptions: Author-driven phenotype data and ontology production. Biodiversity Data Journal 6: e29616. https://doi.org/10.3897/BDJ.6.e29616

  Cui, H. (Contributor), Macklin, J. (Contributor), Sachs, J. (Contributor), Reznicek, A. (Contributor), Starr, J. (Contributor), Ford, B. (Contributor) & Penev, L. (Contributor), ZENODO, Nov 15 2018

  DOI: 10.3897/BDJ.6.e29616.figure2, https://zenodo.org/record/1488471

  Dataset

• MicrO: an ontology of phenotypic and metabolic characters, assays, and culture media found in prokaryotic taxonomic descriptions

  Blank, C. E. (Contributor), Cui, H. (Creator), Moore, L. R. (Creator) & Walls, R. L. (Creator), figshare, 2016

  DOI: 10.6084/m9.figshare.c.3602249, https://figshare.com/collections/MicrO_an_ontology_of_phenotypic_and_metabolic_characters_assays_and_culture_media_found_in_prokaryotic_taxonomic_descriptions/3602249

  Dataset

• MicrO: an ontology of phenotypic and metabolic characters, assays, and culture media found in prokaryotic taxonomic descriptions

  Blank, C. E. (Contributor), Cui, H. (Creator), Moore, L. R. (Creator) & Walls, R. L. (Creator), figshare, 2016

  DOI: 10.6084/m9.figshare.c.3602249.v1, https://figshare.com/collections/MicrO_an_ontology_of_phenotypic_and_metabolic_characters_assays_and_culture_media_found_in_prokaryotic_taxonomic_descriptions/3602249/1

  Dataset