Ecology and Evolutionary Biology

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• Metadata record for: The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data

  Pastorello, G. (Contributor), Trotta, C. (Contributor), Canfora, E. (Contributor), Chu, H. (Contributor), Christianson, D. (Contributor), Cheah, Y. (Contributor), Poindexter, C. (Contributor), Chen, J. (Contributor), Elbashandy, A. (Contributor), Humphrey, M. (Contributor), Isaac, P. (Contributor), Polidori, D. (Contributor), Ribeca, A. (Contributor), van Ingen, C. (Contributor), Zhang, L. (Contributor), Amiro, B. (Contributor), Ammann, C. (Contributor), Arain, M. A. (Contributor), Ardö, J. (Contributor), Arkebauer, T. (Contributor), Arndt, S. K. (Contributor), Arriga, N. (Contributor), Aubinet, M. (Contributor), Aurela, M. (Contributor), Baldocchi, D. (Contributor), Barr, A. (Contributor), Beamesderfer, E. (Contributor), Marchesini, L. B. (Contributor), Bergeron, O. (Contributor), Beringer, J. (Contributor), Bernhofer, C. (Contributor), Berveiller, D. (Contributor), Billesbach, D. (Contributor), Black, T. A. (Contributor), Blanken, P. D. (Contributor), Bohrer, G. (Contributor), Boike, J. (Contributor), Bolstad, P. V. (Contributor), Bonal, D. (Contributor), Bonnefond, J. (Contributor), Bowling, D. R. (Contributor), Bracho, R. (Contributor), Brodeur, J. (Contributor), Brümmer, C. (Contributor), Buchmann, N. (Contributor), Burban, B. (Contributor), Burns, S. P. (Contributor), Buysse, P. (Contributor), Cale, P. (Contributor), Cavagna, M. (Contributor), Cellier, P. (Contributor), Chen, S. (Contributor), Chini, I. (Contributor), Christensen, T. R. (Contributor), Cleverly, J. (Contributor), Collalti, A. (Contributor), Consalvo, C. (Contributor), Cook, B. D. (Contributor), Cook, D. (Contributor), Coursolle, C. (Contributor), Cremonese, E. (Contributor), Curtis, P. S. (Contributor), D'Andrea, E. (Contributor), da Rocha, H. (Contributor), Dai, X. (Contributor), Davis, K. J. (Contributor), De Cinti, B. (Contributor), de Grandcourt, A. (Contributor), De Ligne, A. (Contributor), De Oliveira, R. C. (Contributor), Delpierre, N. (Contributor), Desai, A. R. (Contributor), Di Bella, C. M. (Contributor), di Tommasi, P. (Contributor), Dolman, H. (Contributor), Domingo, F. (Contributor), Dong, G. (Contributor), Dore, S. (Contributor), Duce, P. (Contributor), Dufrêne, E. (Contributor), Dunn, A. (Contributor), Dušek, J. (Contributor), Eamus, D. (Contributor), Eichelmann, U. (Contributor), ElKhidir, H. A. M. (Contributor), Eugster, W. (Contributor), Ewenz, C. M. (Contributor), Ewers, B. (Contributor), Famulari, D. (Contributor), Fares, S. (Contributor), Feigenwinter, I. (Contributor), Feitz, A. (Contributor), Fensholt, R. (Contributor), Filippa, G. (Contributor), Fischer, M. (Contributor), Frank, J. (Contributor), Galvagno, M. (Contributor), Gharun, M. (Contributor), Gianelle, D. (Contributor), Gielen, B. (Contributor), Gioli, B. (Contributor), Gitelson, A. (Contributor), Goded, I. (Contributor), Goeckede, M. (Contributor), Goldstein, A. H. (Contributor), Gough, C. M. (Contributor), Goulden, M. L. (Contributor), Graf, A. (Contributor), Griebel, A. (Contributor), Gruening, C. (Contributor), Grünwald, T. (Contributor), Hammerle, A. (Contributor), Han, S. (Contributor), Han, X. (Contributor), Hansen, B. U. (Contributor), Hanson, C. (Contributor), Hatakka, J. (Contributor), He, Y. (Contributor), Hehn, M. (Contributor), Heinesch, B. (Contributor), Hinko-Najera, N. (Contributor), Hörtnagl, L. (Contributor), Hutley, L. (Contributor), Ibrom, A. (Contributor), Ikawa, H. (Contributor), Jackowicz-Korczynski, M. (Contributor), Janouš, D. (Contributor), Jans, W. (Contributor), Jassal, R. (Contributor), Jiang, S. (Contributor), Kato, T. (Contributor), Khomik, M. (Contributor), Klatt, J. (Contributor), Knohl, A. (Contributor), Knox, S. (Contributor), Kobayashi, H. (Contributor), Koerber, G. (Contributor), Kolle, O. (Contributor), Kosugi, Y. (Contributor), Kotani, A. (Contributor), Kowalski, A. (Contributor), Kruijt, B. (Contributor), Kurbatova, J. (Contributor), Kutsch, W. L. (Contributor), Kwon, H. (Contributor), Launiainen, S. (Contributor), Laurila, T. (Contributor), Law, B. (Contributor), Leuning, R. (Contributor), Li, Y. (Contributor), Liddell, M. (Contributor), Limousin, J. (Contributor), Lion, M. (Contributor), Liska, A. J. (Contributor), Lohila, A. (Contributor), López-Ballesteros, A. (Contributor), López-Blanco, E. (Contributor), Loubet, B. (Contributor), Loustau, D. (Contributor), Lucas-Moffat, A. (Contributor), Lüers, J. (Contributor), Ma, S. (Contributor), Macfarlane, C. (Contributor), Magliulo, V. (Contributor), Maier, R. (Contributor), Mammarella, I. (Contributor), Manca, G. (Contributor), Marcolla, B. (Contributor), Margolis, H. A. (Contributor), Marras, S. (Contributor), Massman, W. (Contributor), Mastepanov, M. (Contributor), Matamala, R. (Contributor), Matthes, J. H. (Contributor), Mazzenga, F. (Contributor), McCaughey, H. (Contributor), McHugh, I. (Contributor), McMillan, A. M. S. (Contributor), Merbold, L. (Contributor), Meyer, W. (Contributor), Meyers, T. (Contributor), Miller, S. D. (Contributor), Minerbi, S. (Contributor), Moderow, U. (Contributor), Monson, R. K. (Contributor), Montagnani, L. (Contributor), Moore, C. E. (Contributor), Moors, E. (Contributor), Moreaux, V. (Contributor), Moureaux, C. (Contributor), Munger, J. W. (Contributor), Nakai, T. (Contributor), Neirynck, J. (Contributor), Nesic, Z. (Contributor), Nicolini, G. (Contributor), Noormets, A. (Contributor), Northwood, M. (Contributor), Nosetto, M. (Contributor), Nouvellon, Y. (Contributor), Novick, K. (Contributor), Oechel, W. (Contributor), Olesen, J. E. (Contributor), Ourcival, J. (Contributor), Papuga, S. A. (Contributor), Parmentier, F. (Contributor), Paul-Limoges, E. (Contributor), Pavelka, M. (Contributor), Peichl, M. (Contributor), Pendall, E. (Contributor), Phillips, R. P. (Contributor), Pilegaard, K. (Contributor), Pirk, N. (Contributor), Posse, G. (Contributor), Powell, T. (Contributor), Prasse, H. (Contributor), Prober, S. M. (Contributor), Rambal, S. (Contributor), Rannik, Ü. (Contributor), Raz-Yaseef, N. (Contributor), Reed, D. (Contributor), de Dios, V. R. (Contributor), Restrepo-Coupe, N. (Contributor), Reverter, B. R. (Contributor), Roland, M. (Contributor), Sabbatini, S. (Contributor), Sachs, T. (Contributor), Saleska, S. R. (Contributor), Sánchez-Cañete, E. P. (Contributor), Sanchez-Mejia, Z. M. (Contributor), Schmid, H. P. (Contributor), Schmidt, M. (Contributor), Schneider, K. (Contributor), Schrader, F. (Contributor), Schroder, I. (Contributor), Scott, R. L. (Contributor), Sedlák, P. (Contributor), Serrano-Ortíz, P. (Contributor), Shao, C. (Contributor), Shi, P. (Contributor), Shironya, I. (Contributor), Siebicke, L. (Contributor), Šigut, L. (Contributor), Silberstein, R. (Contributor), Sirca, C. (Contributor), Spano, D. (Contributor), Steinbrecher, R. (Contributor), Stevens, R. M. (Contributor), Sturtevant, C. (Contributor), Suyker, A. (Contributor), Tagesson, T. (Contributor), Takanashi, S. (Contributor), Tang, Y. (Contributor), Tapper, N. (Contributor), Thom, J. (Contributor), Tiedemann, F. (Contributor), Tomassucci, M. (Contributor), Tuovinen, J. (Contributor), Urbanski, S. (Contributor), Valentini, R. (Contributor), van der Molen, M. (Contributor), van Gorsel, E. (Contributor), van Huissteden, K. (Contributor), Varlagin, A. (Contributor), Verfaillie, J. (Contributor), Vesala, T. (Contributor), Vincke, C. (Contributor), Vitale, D. (Contributor), Vygodskaya, N. (Contributor), Walker, J. P. (Contributor), Walter-Shea, E. (Contributor), Wang, H. (Contributor), Weber, R. (Contributor), Westermann, S. (Contributor), Wille, C. (Contributor), Wofsy, S. (Contributor), Wohlfahrt, G. (Contributor), Wolf, S. (Contributor), Woodgate, W. (Contributor), Li, Y. (Contributor), Zampedri, R. (Contributor), Zhang, J. (Contributor), Zhou, G. (Contributor), Zona, D. (Contributor), Agarwal, D. (Contributor), Biraud, S. (Contributor), Torn, M. (Contributor) & Papale, D. (Contributor), figshare, 2020

  DOI: 10.6084/m9.figshare.12295910.v1, https://springernature.figshare.com/articles/Metadata_record_for_The_FLUXNET2015_dataset_and_the_ONEFlux_processing_pipeline_for_eddy_covariance_data/12295910/1

  Dataset

• Data from: Integrated analyses resolve conflicts over squamate reptile phylogeny and reveal unexpected placements for fossil taxa

  Reeder, T. W. (Creator), Townsend, T. M. (Creator), Mulcahy, D. G. (Creator), Noonan, B. P. (Creator), Wood, P. L. (Creator), Sites, J. W. (Creator) & Wiens, J. J. (Creator), Dryad, 2016

  DOI: 10.5061/dryad.38417, http://datadryad.org/stash/dataset/doi:10.5061/dryad.38417

  Dataset

• Data from: Evolution of diet across the animal Tree of Life

  Román-Palacios, C. (Creator), Scholl, J. P. (Creator) & Wiens, J. J. (Creator), Dryad Digital Repository, 2019

  DOI: 10.5061/dryad.q2d60q3.2, https://datadryad.org/resource/doi:10.5061/dryad.q2d60q3.2

  Dataset

• Datafile S1. from Multicellularity and sex helped shape the Tree of Life

  Chen, L. (Creator) & Wiens, J. J. (Creator), The Royal Society, 2021

  DOI: 10.6084/m9.figshare.14993664.v1, https://rs.figshare.com/articles/dataset/Datafile_S1_from_Multicellularity_and_sex_helped_shape_the_Tree_of_Life/14993664/1

  Dataset

• Supplementary material from "Weapon performance drives weapon evolution"

  Emberts, Z. (Creator), Hwang, W. S. (Creator) & Wiens, J. J. (Creator), The Royal Society, 2021

  DOI: 10.6084/m9.figshare.c.5271460.v1, https://rs.figshare.com/collections/Supplementary_material_from_Weapon_performance_drives_weapon_evolution_/5271460/1

  Dataset

• Supplementary material from "Diversification rates and species richness across the Tree of Life"

  Scholl, J. P. (Creator) & Wiens, J. J. (Creator), figshare, 2016

  DOI: 10.6084/m9.figshare.c.3457455.v1, https://figshare.com/collections/Supplementary_material_from_Diversification_rates_and_species_richness_across_the_Tree_of_Life_/3457455/1

  Dataset

• Data from: Time explains regional richness patterns within clades more often than diversification rates or area

  Li, H. (Contributor) & Wiens, J. J. (Contributor), ZENODO, 2018

  DOI: 10.5061/dryad.72b792p, https://zenodo.org/record/4938791

  Dataset

• combined ESM

  Scholl, J. P. (Creator) & Wiens, J. J. (Contributor), The Royal Society, 2016

  DOI: 10.6084/m9.figshare.3795996.v1, https://rs.figshare.com/articles/dataset/combined_ESM/3795996/1

  Dataset

• Dataset S3. from Correlated and decoupled evolution of adult and larval body size in frogs

  Phung, T. X. (Creator), Nascimento, J. C. S. (Creator), Novarro, A. J. (Creator) & Wiens, J. J. (Creator), The Royal Society, 2020

  DOI: 10.6084/m9.figshare.12820059.v1, https://rs.figshare.com/articles/Dataset_S3_from_Correlated_and_decoupled_evolution_of_adult_and_larval_body_size_in_frogs/12820059/1

  Dataset

• Data from: Climate change is projected to outpace rates of niche change in grasses

  Wiens, J. J. (Creator), Dryad, 2016

  DOI: 10.5061/dryad.2kd28, http://datadryad.org/stash/dataset/doi:10.5061/dryad.2kd28

  Dataset

• Datafile S6. from Multicellularity and sex helped shape the Tree of Life

  Chen, L. (Creator) & Wiens, J. J. (Creator), The Royal Society, 2021

  DOI: 10.6084/m9.figshare.14993655.v1, https://rs.figshare.com/articles/dataset/Datafile_S6_from_Multicellularity_and_sex_helped_shape_the_Tree_of_Life/14993655/1

  Dataset

• Data from: Multicellularity drives the evolution of sexual traits

  Hanschen, E. R. (Creator), Herron, M. D. (Creator), Wiens, J. J. (Creator), Nozaki, H. (Creator) & Michod, R. E. (Creator), Dryad, 2018

  DOI: 10.5061/dryad.rr3667m, http://datadryad.org/stash/dataset/doi:10.5061/dryad.rr3667m

  Dataset

• Datafile S5: from Higher temperatures lower rates of physiological and niche evolution

  Qu, Y. (Contributor) & Wiens, J. J. (Creator), The Royal Society, 2020

  DOI: 10.6084/m9.figshare.12597082.v13, https://rs.figshare.com/articles/Datafile_S4_from_Higher_temperatures_lower_rates_of_physiological_and_niche_evolution/12597082/13

  Dataset

• Data from: Comparing macroecological patterns across continents: evolution of climatic niche breadth in varanid lizards

  Lin, L. (Creator) & Wiens, J. J. (Creator), Dryad Digital Repository, 2016

  DOI: 10.5061/dryad.h0v84.2, https://datadryad.org/resource/doi:10.5061/dryad.h0v84.2

  Dataset

• Data from: Life-history strategy and behavioral type: risk-tolerance reflects growth rate and energy allocation in ant colonies

  Bengston, S. E. (Contributor), Shin, M. (Contributor) & Dornhaus, A. R. (Contributor), ZENODO, 2016

  DOI: 10.5061/dryad.0062v, https://zenodo.org/record/5026152

  Dataset

• Data from: 1970s and 'Patient 0' HIV-1 genomes illuminate early HIV/AIDS history in North America

  Worobey, M. (Contributor), Watts, T. D. (Contributor), McKay, R. A. (Contributor), Suchard, M. A. (Contributor), Granade, T. (Contributor), Teuwen, D. E. (Contributor), Koblin, B. A. (Contributor), Heneine, W. (Contributor), Lemey, P. (Contributor) & Jaffe, H. W. (Contributor), ZENODO, 2017

  DOI: 10.5061/dryad.7mv7v, https://zenodo.org/record/4983103

  Dataset

• Supplementary material from "Exceptional diversity and selection pressure on coronavirus host receptors in bats compared to other mammals"

  Frank, H. K. (Creator), Enard, D. (Creator) & Boyd, S. D. (Creator), The Royal Society, 2022

  DOI: 10.6084/m9.figshare.c.6080908.v1, https://rs.figshare.com/collections/Supplementary_material_from_Exceptional_diversity_and_selection_pressure_on_coronavirus_host_receptors_in_bats_compared_to_other_mammals_/6080908/1

  Dataset

• Data from: Disentangling methodological and biological sources of gene tree discordance on Oryza (Poaceae) chromosome 3

  Zwickl, D. J. (Creator), Stein, J. C. (Creator), Wing, R. A. (Creator), Ware, D. (Creator) & Sanderson, M. J. (Creator), Dryad Digital Repository, 2014

  DOI: 10.5061/dryad.6169b.2, https://datadryad.org/resource/doi:10.5061/dryad.6169b.2

  Dataset

• Data from: Hydrological niche segregation defines forest structure and drought tolerance strategies in a seasonal Amazon forest

  Brum, M. (Creator), Vadeboncoeur, M. A. (Creator), Ivanov, V. (Creator), Asbjornsen, H. (Creator), Saleska, S. R. (Creator), Alves, L. F. (Creator), Penha, D. (Creator), Dias, J. D. (Creator), Aragão, L. E. O. C. (Creator), Barros, F. (Creator), Bittencourt, P. (Creator), Pereira, L. (Creator) & Oliveira, R. S. (Creator), Dryad, 2019

  DOI: 10.5061/dryad.v704dj2, http://datadryad.org/stash/dataset/doi:10.5061/dryad.v704dj2

  Dataset

• Appendix C. Key governing equations for simulating net ecosystem productivity in ecosys: gross primary productivity and autotrophic respiration.

  Grant, R. F. (Contributor), Hutyra, L. R. (Contributor), Munger, J. W. (Contributor), Saleska, S. R. (Contributor) & Wofsy, S. C. (Contributor), figshare, 2016

  DOI: 10.6084/m9.figshare.3566730, https://figshare.com/articles/Appendix_C_Key_governing_equations_for_simulating_net_ecosystem_productivity_in_ecosys_gross_primary_productivity_and_autotrophic_respiration_/3566730

  Dataset

• Appendix B. Summary data distinguishing four ant species that visit the extrafloral nectaries of Ferocactus wislizeni, and reproduction on plants typically tended by those ants.

  Ness, J. H. (Contributor), Morris, W. F. (Contributor) & Bronstein, J. (Contributor), figshare, 2016

  DOI: 10.6084/m9.figshare.3526022, https://figshare.com/articles/Appendix_B_Summary_data_distinguishing_four_ant_species_that_visit_the_extrafloral_nectaries_of_Ferocactus_wislizeni_and_reproduction_on_plants_typically_tended_by_those_ants_/3526022

  Dataset

• Appendix D. A figure showing the distribution of net relatedness index and nearest taxon index in 25-m2 quadrats across organismal size scales in each forest dynamics plot.

  Swenson, N. G. (Creator), Enquist, B. J. (Creator), Thompson, J. (Creator) & Zimmerman, J. K. (Creator), figshare, 2016

  DOI: 10.6084/m9.figshare.3527963, https://figshare.com/articles/Appendix_D_A_figure_showing_the_distribution_of_net_relatedness_index_and_nearest_taxon_index_in_25-m2_quadrats_across_organismal_size_scales_in_each_forest_dynamics_plot_/3527963

  Dataset

• Optimal Defense Theory in an ant‐plant mutualism: extrafloral nectar as an induced defense is maximized in the most valuable plant structures

  Calixto, E. S. (Creator), Lange, D. (Creator), Bronstein, J. (Creator), Torezan-Silingardi, H. M. (Creator) & Del-Claro, K. (Creator), Dryad, 2020

  DOI: 10.5061/dryad.stqjq2c0x, http://datadryad.org/stash/dataset/doi:10.5061/dryad.stqjq2c0x

  Dataset

• Supplementary material from "Noisy communities and signal detection: why do foragers visit rewardless flowers?"

  Lichtenberg, E. M. (Creator), Heiling, J. M. (Creator), Bronstein, J. (Creator) & Barker, J. L. (Creator), The Royal Society, 2020

  DOI: 10.6084/m9.figshare.c.4944471, https://rs.figshare.com/collections/Supplementary_material_from_Noisy_communities_and_signal_detection_why_do_foragers_visit_rewardless_flowers_/4944471

  Dataset

• Age-related variation in the oral microbiome of urban Cooper’s hawks (Accipiter cooperii)

  Taylor, M. J. (Creator), Mannan, R. W. (Contributor), Uren, J. M. (Contributor), Garber, N. P. (Creator), Gallery, R. E. (Creator) & Arnold, A. E. (Contributor), figshare, 2019

  DOI: 10.6084/m9.figshare.c.4410926.v1, https://springernature.figshare.com/collections/Age-related_variation_in_the_oral_microbiome_of_urban_Cooper_s_hawks_Accipiter_cooperii_/4410926/1

  Dataset