Ecology and Evolutionary Biology

Search results

• Data from: Predicting the response to simultaneous selection: genetic architecture and physiological constraints

  Davidowitz, G. (Contributor), Nijhout, H. F. (Contributor) & Roff, D. A. (Contributor), ZENODO, Mar 9 2012

  DOI: 10.5061/dryad.p462j4f3, https://zenodo.org/records/4991633

  Dataset

• Supplementary material from "Exceptional diversity and selection pressure on coronavirus host receptors in bats compared to other mammals"

  Frank, H. K. (Creator), Enard, D. (Creator) & Boyd, S. D. (Creator), The Royal Society, 2022

  DOI: 10.6084/m9.figshare.c.6080908, https://rs.figshare.com/collections/Supplementary_material_from_Exceptional_diversity_and_selection_pressure_on_coronavirus_host_receptors_in_bats_compared_to_other_mammals_/6080908

  Dataset

• Novel brown adipose tissue candidate genes predicted by the human gene connectome - Supplementary Appendix

  Salazar-Tortosa, D. F. (Contributor), Enard, D. (Contributor), Itan, Y. (Contributor) & R Ruiz, J. (Contributor), ZENODO, Aug 28 2020

  DOI: 10.5281/zenodo.4006456, https://zenodo.org/record/4006456

  Dataset

• Data from: Shifts in mutation bias promote mutators by altering the distribution of fitness effects

  Tuffaha, M. (Contributor), Varakunan, S. (Contributor), Castellano, D. (Contributor), Gutenkunst, R. (Contributor) & Wahl, L. (Contributor), ZENODO, Jul 13 2023

  DOI: 10.5061/dryad.qz612jmk2, https://zenodo.org/records/8144856

  Dataset

• BATCAVE: Bayesian Analysis Tools for Context-Aware Variant Evaluation - tumor simulationsd

  Mannakee, B. K. (Contributor) & Gutenkunst, R. N. (Contributor), ZENODO, Oct 3 2019

  DOI: 10.5281/zenodo.3471741, https://zenodo.org/record/3471741

  Dataset

• The impact of genome-wide association studies on biomedical research publications

  Struck, T. J. (Creator), Mannakee, B. K. (Creator) & Gutenkunst, R. N. (Creator), figshare, 2018

  DOI: 10.6084/m9.figshare.c.4197353, https://figshare.com/collections/The_impact_of_genome-wide_association_studies_on_biomedical_research_publications/4197353

  Dataset

• Multiple environmental stressors induce an adaptive maternal effect

  Potticary, A. (Contributor) & Duckworth, R. (Contributor), ZENODO, Oct 21 2020

  DOI: 10.5061/dryad.z08kprr99, https://zenodo.org/records/4116982

  Dataset

• BATCAVE: Bayesian Analysis Tools for Context-Aware Variant Evaluation

  Mannakee, B. K. (Contributor) & Gutenkunst, R. N. (Contributor), ZENODO, Oct 3 2019

  DOI: 10.5281/zenodo.3471715, https://zenodo.org/record/3471715

  Dataset

• Supplementary Material: Python Code from Branching principles of animal and plant networks identified by combining extensive data, machine learning and modelling

  Brummer, A. B. (Creator), Lymperopoulos, P. (Creator), Shen, J. (Creator), Tekin, E. (Creator), Bentley, L. P. (Creator), Buzzard, V. (Creator), Gray, A. (Creator), Oliveras, I. (Creator), Enquist, B. J. (Creator), Savage, V. M. (Creator) & Lymperopoulos, P. (Creator), The Royal Society, 2020

  DOI: 10.6084/m9.figshare.13370339, https://rs.figshare.com/articles/software/Supplementary_Material_Python_Code_from_Branching_principles_of_animal_and_plant_networks_identified_by_combining_extensive_data_machine_learning_and_modelling/13370339

  Dataset

• Interannual variability of growth and reproduction in Bursera simaruba: the role of allometry and resource variability

  Hulshof, C. M. (Creator), Stegen, J. C. (Creator), Swenson, N. G. (Creator), Enquist, C. A. F. (Creator) & Enquist, B. J. (Creator), figshare, 2016

  DOI: 10.6084/m9.figshare.c.3304356, https://figshare.com/collections/Interannual_variability_of_growth_and_reproduction_in_i_Bursera_simaruba_i_the_role_of_allometry_and_resource_variability/3304356

  Dataset

• Tradeoff between robustness and elaboration in carotenoid networks produces cycles of avian color diversification

  Badyaev, A. V. (Creator), Morrison, E. S. (Creator), Belloni, V. (Creator) & Sanderson, M. J. (Creator), figshare, 2015

  DOI: 10.6084/m9.figshare.c.3620960.v1, https://figshare.com/collections/Tradeoff_between_robustness_and_elaboration_in_carotenoid_networks_produces_cycles_of_avian_color_diversification/3620960/1

  Dataset

• Data from: Estimating diversification rates for higher taxa: BAMM can give problematic estimates of rates and rate shifts

  Meyer, A. L. S. (Creator) & Wiens, J. J. (Creator), Dryad, Nov 8 2017

  DOI: 10.5061/dryad.db561, https://datadryad.org/stash/dataset/doi:10.5061/dryad.db561

  Dataset

• Data from: Age‐dependent leaf physiology and consequences for crown‐scale carbon uptake during the dry season in an Amazon evergreen forest

  Albert, L. P. (Contributor), Wu, J. (Contributor), Prohaska, N. (Contributor), de Camargo, P. B. (Contributor), Huxman, T. E. (Contributor), Tribuzy, E. S. (Contributor), Ivanov, V. Y. (Contributor), Oliveira, R. S. (Contributor), Garcia, S. (Contributor), Smith, M. N. (Contributor), Oliveira Junior, R. C. (Contributor), Restrepo-Coupe, N. (Contributor), da Silva, R. (Contributor), Stark, S. C. (Contributor), Martins, G. A. (Contributor), Penha, D. V. (Contributor) & Saleska, S. R. (Contributor), ZENODO, Jan 19 2019

  DOI: 10.5061/dryad.h83t0, https://zenodo.org/records/4998105

  Dataset

• Appendix E. Tabular results for female reproductive allocation as a function of relative growth rate from log–log transformed ordinary least squares, ordinary least squares bisector and reduced major axis regressions.

  Hulshof, C. M. (Creator), Stegen, J. C. (Creator), Swenson, N. G. (Creator), Enquist, C. A. F. (Creator) & Enquist, B. J. (Creator), Wiley, 2016

  DOI: 10.6084/m9.figshare.3552447.v1, https://wiley.figshare.com/articles/dataset/Appendix_E_Tabular_results_for_female_reproductive_allocation_as_a_function_of_relative_growth_rate_from_log_log_transformed_ordinary_least_squares_ordinary_least_squares_bisector_and_reduced_major_axis_regressions_/3552447/1

  Dataset

• Supplementary Material for: Plasticity of the Worker Bumblebee Brain in Relation to Age and Rearing Environment

  Jones, B. M. (Creator), Leonard, A. S. (Creator), Papaj, D. R. (Creator) & Gronenberg, W. (Creator), Karger Publishers, 2017

  DOI: 10.6084/m9.figshare.4750711.v1, https://karger.figshare.com/articles/dataset/Supplementary_Material_for_Plasticity_of_the_Worker_Bumblebee_Brain_in_Relation_to_Age_and_Rearing_Environment/4750711/1

  Dataset

• ON ESTIMATING THE EXPONENT OF POWER-LAW FREQUENCY DISTRIBUTIONS

  White, E. P. (Creator), Enquist, B. J. (Creator) & Green, J. L. (Creator), figshare, 2016

  DOI: 10.6084/m9.figshare.c.3300260, https://figshare.com/collections/ON_ESTIMATING_THE_EXPONENT_OF_POWER-LAW_FREQUENCY_DISTRIBUTIONS/3300260

  Dataset

• Appendix D. Mean quantum efficiency of photosystem II and net photosynthesis at each temperature for every species and date of harvest.

  Gremer, J. R. (Creator), Kimball, S. (Creator), Angert, A. L. (Creator), Venable, D. L. (Contributor) & Huxman, T. E. (Creator), Wiley, 2016

  DOI: 10.6084/m9.figshare.3554934.v1, https://wiley.figshare.com/articles/dataset/Appendix_D_Mean_quantum_efficiency_of_photosystem_II_and_net_photosynthesis_at_each_temperature_for_every_species_and_date_of_harvest_/3554934/1

  Dataset

• Additional file 3: of Chloroplast sequence variation and the efficacy of peptide nucleic acids for blocking host amplification in plant microbiome studies

  Fitzpatrick, C. R. (Creator), Lu-Irving, P. (Creator), Copeland, J. (Creator), Guttman, D. S. (Creator), Wang, P. W. (Creator), Baltrus, D. A. (Creator), Dlugosch, K. M. (Creator), Johnson, M. T. J. (Creator) & Guttman, D. (Creator), figshare, 2018

  DOI: 10.6084/m9.figshare.6983108, https://springernature.figshare.com/articles/Additional_file_3_of_Chloroplast_sequence_variation_and_the_efficacy_of_peptide_nucleic_acids_for_blocking_host_amplification_in_plant_microbiome_studies/6983108

  Dataset

• Appendix B. A table showing the mean distance that ants differing in body length disperse diaspores that differ in mass.

  Ness, J. H. (Contributor), Bronstein, J. L. (Contributor), Andersen, A. N. (Contributor) & Holland, J. N. (Contributor), Wiley, 2016

  DOI: 10.6084/m9.figshare.3523304.v1, https://wiley.figshare.com/articles/dataset/Appendix_B_A_table_showing_the_mean_distance_that_ants_differing_in_body_length_disperse_diaspores_that_differ_in_mass_/3523304/1

  Dataset

• Supplementary material from "Allometric analysis of brain cell number in hymenoptera suggests ant brains diverge from general trends"

  Godfrey, R. K. (Creator), Swartzlander, M. (Creator) & Gronenberg, W. (Contributor), The Royal Society, 2021

  DOI: 10.6084/m9.figshare.c.5335259, https://rs.figshare.com/collections/Supplementary_material_from_Allometric_analysis_of_brain_cell_number_in_hymenoptera_suggests_ant_brains_diverge_from_general_trends_/5335259

  Dataset

• Supplemental Material for Foy et al., 2019

  Foy, S. G. (Creator), Wilson, B. A. (Creator), Bertram, J. (Creator), Cordes, M. H. J. (Creator) & Masel, J. (Creator), figshare, 2019

  DOI: 10.25386/genetics.7597616, https://gsajournals.figshare.com/articles/Supplemental_Material_for_Foy_et_al_2019/7597616

  Dataset

• Data from: Chromosome-scale inference of hybrid speciation and admixture with convolutional neural networks

  Blischak, P. D. (Creator), Barker, M. S. (Creator) & Gutenkunst, R. N. (Creator), Dryad, Aug 6 2020

  DOI: 10.5061/dryad.63xsj3v0r, https://datadryad.org/stash/dataset/doi:10.5061/dryad.63xsj3v0r

  Dataset

• Additional file 4: Table S4. of Insights into transcriptional changes that accompany organelle sequestration from the stolen nucleus of Mesodinium rubrum

  Lasek-Nesselquist, E. (Creator), Wisecaver, J. H. (Creator), Hackett, J. D. (Creator) & Johnson, M. D. (Creator), figshare, 2015

  DOI: 10.6084/m9.figshare.c.3625946_d1.v1, https://springernature.figshare.com/articles/dataset/Additional_file_4_Table_S4_of_Insights_into_transcriptional_changes_that_accompany_organelle_sequestration_from_the_stolen_nucleus_of_Mesodinium_rubrum/4408748/1

  Dataset

• The implications of lineage-specific rates for divergence time estimation

  Carruthers, T. (Contributor), Sanderson, M. J. (Contributor) & Scotland, R. W. (Contributor), ZENODO, Jan 8 2020

  DOI: 10.5061/dryad.m1n6m0m, https://zenodo.org/records/4986605

  Dataset

• Additional file 3 of Gene fusion as an important mechanism to generate new genes in the genus Oryza

  Zhou, Y. (Creator), Zhang, C. (Creator), Zhang, L. (Creator), Ye, Q. (Creator), Liu, N. (Creator), Wang, M. (Creator), Long, G. (Creator), Fan, W. (Creator), Long, M. (Creator) & Wing, R. A. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.20081159, https://springernature.figshare.com/articles/dataset/Additional_file_3_of_Gene_fusion_as_an_important_mechanism_to_generate_new_genes_in_the_genus_Oryza/20081159

  Dataset