Applied Mathematics - GIDP – Scholarly Works

Dominelli, P. B., Wiggins, C. C., Roy, T. K., Secomb, T. W., Curry, T. B. & Joyner, M. J., Apr 2021, In: Mayo Clinic Proceedings. 96, 4, p. 1017-1032 16 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

15 Scopus citations

Use of observing system simulation experiments in the United States

Zeng, X., Atlas, R., Birk, R. J., Carr, F. H., Carrier, M. J., Cucurull, L., Hooke, W. H., Kalnay, E., Murtugudde, R., Posselt, D. J., Russell, J. L., Tyndall, D. P., Weller, R. A. & Zhang, F., 2021, In: Bulletin of the American Meteorological Society. 101, 8, p. E1427-E1438

Research output: Contribution to journal › Review article › peer-review

Open Access

43 Scopus citations

2020

On fusion methods for knowledge discovery from multi-omics datasets

Baldwin, E., Han, J., Luo, W., Zhou, J., An, L., Liu, J., Zhang, H. H. & Li, H., 2020, In: Computational and Structural Biotechnology Journal. 18, p. 509-517 9 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

18 Scopus citations

2019

Back to the future: Using long-term observational and paleo-proxy reconstructions to improve model projections of antarctic climate

Bracegirdle, T. J., Colleoni, F., Abram, N. J., Bertler, N. A. N., Dixon, D. A., England, M., Favier, V., Fogwill, C. J., Fyfe, J. C., Goodwin, I., Goosse, H., Hobbs, W., Jones, J. M., Keller, E. D., Khan, A. L., Phipps, S. J., Raphael, M. N., Russell, J., Sime, L. & Thomas, E. R. & 2 others, van den Broeke, M. R. & Wainer, I., Jun 2019, In: Geosciences (Switzerland). 9, 6, 255.

Research output: Contribution to journal › Review article › peer-review

Open Access

28 Scopus citations

Filamentation of long-wave infrared pulses in the atmosphere [Invited]

Tochitsky, S., Welch, E., Panagiotopoulos, P., Polyanskiy, M., Pogorelsky, I., Kolesik, M., Koch, S. W., Moloney, J. V. & Joshi, C., 2019, In: Journal of the Optical Society of America B: Optical Physics. 36, 10, p. G40-G51

Research output: Contribution to journal › Review article › peer-review

Open Access

5 Scopus citations

Quantum Mechanical and Molecular Mechanics Modeling of Membrane-Embedded Rhodopsins

Ryazantsev, M. N., Nikolaev, D. M., Struts, A. V. & Brown, M. F., Oct 1 2019, In: Journal of Membrane Biology. 252, 4-5, p. 425-449 25 p.

Research output: Contribution to journal › Review article › peer-review

12 Scopus citations

Resonant Kuiper belt objects: a review

Malhotra, R., Dec 1 2019, In: Geoscience Letters. 6, 1, 12.

Research output: Contribution to journal › Review article › peer-review

Open Access

20 Scopus citations

Tantalizing new physics from the cosmic purview

Melia, F., Aug 30 2019, In: Modern Physics Letters A. 34, 26, 1930004.

Research output: Contribution to journal › Review article › peer-review

Open Access

3 Scopus citations

2018

Blocking “don't eat me” signal of CD47-SIRPα in hematological malignancies, an in-depth review

Russ, A., Hua, A. B., Montfort, W. R., Rahman, B., Riaz, I. B., Khalid, M. U., Carew, J. S., Nawrocki, S. T., Persky, D. & Anwer, F., Nov 2018, In: Blood Reviews. 32, 6, p. 480-489 10 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

145 Scopus citations

Frontiers of cancer imaging and guided therapy using ultrasound, light, and microwaves

Witte, R. S., Karunakaran, C., Zuniga, A. N., Schmitz, H. & Arif, H., Aug 1 2018, In: Clinical and Experimental Metastasis. 35, 5-6, p. 413-418 6 p.

Research output: Contribution to journal › Review article › peer-review

10 Scopus citations

Sex in microbial pathogens

Bernstein, H., Bernstein, C. & Michod, R. E., Jan 2018, In: Infection, Genetics and Evolution. 57, p. 8-25 18 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

16 Scopus citations

2017

Blood Flow in the Microcirculation

Secomb, T. W., Jan 3 2017, In: Annual Review of Fluid Mechanics. 49, p. 443-461 19 p.

Research output: Contribution to journal › Review article › peer-review

243 Scopus citations

Concepts and Methods of Solid-State NMR Spectroscopy Applied to Biomembranes

Molugu, T. R., Lee, S. & Brown, M. F., Oct 11 2017, In: Chemical Reviews. 117, 19, p. 12087-12132 46 p.

Research output: Contribution to journal › Review article › peer-review

82 Scopus citations

Localization properties of the disordered XY spin chain: A review of mathematical results with an eye toward many-body localization

Abdul-Rahman, H., Nachtergaele, B., Sims, R. & Stolz, G., Jul 2017, In: Annalen der Physik. 529, 7, 1600280.

Research output: Contribution to journal › Review article › peer-review

Open Access

31 Scopus citations

Soft Matter in Lipid-Protein Interactions

Brown, M. F., May 22 2017, In: Annual Review of Biophysics. 46, p. 379-410 32 p.

Research output: Contribution to journal › Review article › peer-review

89 Scopus citations

Structure and Activation of Soluble Guanylyl Cyclase, the Nitric Oxide Sensor

Montfort, W. R., Wales, J. A. & Weichsel, A., Jan 20 2017, In: Antioxidants and Redox Signaling. 26, 3, p. 107-121 15 p.

Research output: Contribution to journal › Review article › peer-review

96 Scopus citations

Transport of drugs from blood vessels to tumour tissue

Dewhirst, M. W. & Secomb, T. W., Dec 1 2017, In: Nature Reviews Cancer. 17, 12, p. 738-750 13 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

519 Scopus citations

Ultrafast non-equilibrium carrier dynamics in semiconductor laser mode-locking

Hader, J., Scheller, M., Laurain, A., Kilen, I., Baker, C., Moloney, J. V. & Koch, S. W., Jan 2017, In: Semiconductor Science and Technology. 32, 1, 013002.

Research output: Contribution to journal › Review article › peer-review

24 Scopus citations

2016

Gravitational instabilities in circumstellar disks

Kratter, K. & Lodato, G., Sep 19 2016, In: Annual Review of Astronomy and Astrophysics. 54, p. 271-311 41 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

333 Scopus citations

Modeling of cerebral oxygen transport based on In vivo microscopic imaging of microvascular network structure, blood flow, and oxygenation

Gagnon, L., Smith, A. F., Boas, D. A., Devor, A., Secomb, T. W. & Sakadžić, S., Aug 31 2016, In: Frontiers in Computational Neuroscience. 10, AUG, 82.

Research output: Contribution to journal › Review article › peer-review

Open Access

57 Scopus citations

On the Quantification of Cellular Velocity Fields

Vig, D. K., Hamby, A. E. & Wolgemuth, C. W., Apr 12 2016, In: Biophysical Journal. 110, 7, p. 1469-1475 7 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

51 Scopus citations

Programmed Cell Death and Complexity in Microbial Systems

Durand, P. M., Sym, S. & Michod, R. E., Jul 11 2016, In: Current Biology. 26, 13, p. R587-R593

Research output: Contribution to journal › Review article › peer-review

Open Access

56 Scopus citations

2015

Diffusive transport in two-dimensional nematics

Fatkullin, I. & Slastikov, V., Apr 1 2015, In: Discrete and Continuous Dynamical Systems - Series S. 8, 2, p. 323-340 18 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

Elastic deformation and area per lipid of membranes: Atomistic view from solid-state deuterium NMR spectroscopy

Kinnun, J. J., Mallikarjunaiah, K. J., Petrache, H. I. & Brown, M. F., Jan 2015, In: Biochimica et Biophysica Acta - Biomembranes. 1848, 1, p. 246-259 14 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

46 Scopus citations

Flagellar motility of the pathogenic spirochetes

Wolgemuth, C. W., Oct 1 2015, In: Seminars in Cell and Developmental Biology. 46, p. 104-112 9 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

43 Scopus citations

Laser vision: lidar as a transformative tool to advance critical zone science

Harpold, A. A., Marshall, J. A., Lyon, S. W., Barnhart, T. B., Fisher, B. A., Donovan, M., Brubaker, K. M., Crosby, C. J., Glenn, N. F., Glennie, C. L., Kirchner, P. B., Lam, N., Mankoff, K. D., McCreight, J. L., Molotch, N. P., Musselman, K. N., Pelletier, J., Russo, T., Sangireddy, H. & Sjöberg, Y. & 2 others, Swetnam, T. & West, N., Jun 22 2015, In: Hydrology and Earth System Sciences. 19, 6, p. 2881-2897 17 p.

Research output: Contribution to journal › Review article › peer-review

40 Scopus citations

Ovarian serous carcinogenesis from tubal secretory cells

Zhang, W., Wei, L., Li, L., Yang, B., Kong, B., Yao, G. & Zheng, W., Nov 2015, In: Histology and Histopathology. 30, 11, p. 1295-1302 8 p.

Research output: Contribution to journal › Review article › peer-review

7 Scopus citations

Phyllotaxis: Some progress, but a story far from over

Pennybacker, M. F., Shipman, P. D. & Newell, A. C., Jun 15 2015, In: Physica D: Nonlinear Phenomena. 306, p. 48-81 34 p., 31628.

Research output: Contribution to journal › Review article › peer-review

29 Scopus citations

Task-based measures of image quality and their relation to radiation dose and patient risk

Barrett, H. H., Myers, K. J., Hoeschen, C., Kupinski, M. A. & Little, M. P., Jan 1 2015, In: Physics in medicine and biology. 60, 2, p. R1-R75

Research output: Contribution to journal › Review article › peer-review

106 Scopus citations

2014

Machine learning for Big Data analytics in plants

Ma, C., Zhang, H. H. & Wang, X., Dec 1 2014, In: Trends in Plant Science. 19, 12, p. 798-808 11 p.

Research output: Contribution to journal › Review article › peer-review

200 Scopus citations

Making microvascular networks work: Angiogenesis, Remodeling, And pruning

Pries, A. R. & Secomb, T. W., Nov 1 2014, In: Physiology. 29, 6, p. 446-455 10 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

89 Scopus citations

Modeling and simulation techniques in extreme nonlinear optics of gaseous and condensed media

Kolesik, M. & Moloney, J. V., Jan 2014, In: Reports on Progress in Physics. 77, 1, 016401.

Research output: Contribution to journal › Review article › peer-review

67 Scopus citations

Modelling mammalian cellular quiescence

Yao, G., 2014, In: Interface Focus. 4, 3

Research output: Contribution to journal › Review article › peer-review

Open Access

117 Scopus citations

Special issues on advances in quantitative genetics: Introduction

Walsh, B., Jan 2014, In: Heredity. 112, 1, p. 1-3 3 p.

Research output: Contribution to journal › Review article › peer-review

9 Scopus citations

2013

Shape transitions in hyperbolic non-Euclidean plates

Gemmer, J. & Venkataramani, S. C., Sep 14 2013, In: Soft Matter. 9, 34, p. 8151-8161 11 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

29 Scopus citations

2012

Fluvial and slope-wash erosion of soil-mantled landscapes: Detachment- or transport-limited?

Pelletier, J. D., Jan 2012, In: Earth Surface Processes and Landforms. 37, 1, p. 37-51 15 p.

Research output: Contribution to journal › Review article › peer-review

35 Scopus citations

Molecular simulations and solid-state NMR investigate dynamical structure in rhodopsin activation

Mertz, B., Struts, A. V., Feller, S. E. & Brown, M. F., Feb 2012, In: Biochimica et Biophysica Acta - Biomembranes. 1818, 2, p. 241-251 11 p.

Research output: Contribution to journal › Review article › peer-review

34 Scopus citations

Theory and simulation of ultrafast intense pulse propagation in extended media

Kolesik, M., Townsend, P. & Moloney, J. V., 2012, In: IEEE Journal on Selected Topics in Quantum Electronics. 18, 1, p. 494-506 13 p., 6145139.

Research output: Contribution to journal › Review article › peer-review

19 Scopus citations

2011

An NMR database for simulations of membrane dynamics

Leftin, A. & Brown, M. F., Mar 2011, In: Biochimica et Biophysica Acta - Biomembranes. 1808, 3, p. 818-839 22 p.

Research output: Contribution to journal › Review article › peer-review

95 Scopus citations

Diagnostic and therapeutic imaging for cancer: Therapeutic considerations and future directions

Roach, M., Alberini, J. L., Pecking, A. P., Testori, A., Verrecchia, F., Soteldo, J., Ganswindt, U., Joyal, J. L., Babich, J. W., Witte, R. S., Unger, E. & Gottlieb, R., May 1 2011, In: Journal of Surgical Oncology. 103, 6, p. 587-601 15 p.

Research output: Contribution to journal › Review article › peer-review

17 Scopus citations

The microcirculation: Physiology at the mesoscale

Secomb, T. W. & Pries, A. R., Mar 2011, In: Journal of Physiology. 589, 5, p. 1047-1052 6 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

49 Scopus citations

Theoretical models for coronary vascular biomechanics: Progress & challenges

Waters, S. L., Alastruey, J., Beard, D. A., Bovendeerd, P. H. M., Davies, P. F., Jayaraman, G., Jensen, O. E., Lee, J., Parker, K. H., Popel, A. S., Secomb, T. W., Siebes, M., Sherwin, S. J., Shipley, R. J., Smith, N. P. & van de Vosse, F. N., Jan 2011, In: Progress in Biophysics and Molecular Biology. 104, 1-3, p. 49-76 28 p.

Research output: Contribution to journal › Review article › peer-review

Open Access

59 Scopus citations

Applied Mathematics - GIDP

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