Applied BioSciences - GIDP

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• Data from: Interaction networks of macrofungi and mycophagous beetles reflect diurnal variation and the size and spatial arrangement of resources

  Epps, M. J. (Creator) & Arnold, A. E. (Creator), Dryad, 2019

  DOI: 10.5061/dryad.8bk7d72, http://datadryad.org/stash/dataset/doi:10.5061/dryad.8bk7d72

  Dataset

• Appendix E. Statistical tables for regression analyses regarding effects of latitude and annual rainfall on endophyte incidence and diversity.

  Arnold, A. E. (Contributor) & Lutzoni, F. (Contributor), figshare, 2016

  DOI: 10.6084/m9.figshare.3527345, https://figshare.com/articles/Appendix_E_Statistical_tables_for_regression_analyses_regarding_effects_of_latitude_and_annual_rainfall_on_endophyte_incidence_and_diversity_/3527345

  Dataset

• Age-related variation in the oral microbiome of urban Cooper’s hawks (Accipiter cooperii)

  Taylor, M. J. (Creator), Mannan, R. W. (Contributor), Uren, J. M. (Contributor), Garber, N. P. (Creator), Gallery, R. E. (Creator) & Arnold, A. E. (Contributor), figshare, 2019

  DOI: 10.6084/m9.figshare.c.4410926.v1, https://springernature.figshare.com/collections/Age-related_variation_in_the_oral_microbiome_of_urban_Cooper_s_hawks_Accipiter_cooperii_/4410926/1

  Dataset

• AtPIG-S, a predicted Glycosylphosphatidylinositol Transamidase subunit, is critical for pollen tube growth in Arabidopsis

  Desnoyer, N. (Creator), Howard, G. (Creator), Jong, E. (Creator) & Palanivelu, R. (Creator), figshare, 2020

  DOI: 10.6084/m9.figshare.c.5095655.v1, https://springernature.figshare.com/collections/AtPIG-S_a_predicted_Glycosylphosphatidylinositol_Transamidase_subunit_is_critical_for_pollen_tube_growth_in_Arabidopsis/5095655/1

  Dataset

• Additional file 1 of AtPIG-S, a predicted Glycosylphosphatidylinositol Transamidase subunit, is critical for pollen tube growth in Arabidopsis

  Jong, E. (Creator), Palanivelu, R. (Creator), Desnoyer, N. (Creator) & Howard, G. (Creator), figshare, 2020

  DOI: 10.6084/m9.figshare.12825329, https://springernature.figshare.com/articles/figure/Additional_file_1_of_AtPIG-S_a_predicted_Glycosylphosphatidylinositol_Transamidase_subunit_is_critical_for_pollen_tube_growth_in_Arabidopsis/12825329

  Dataset

• 1M0F : Structural Studies of Bacteriophage alpha3 Assembly, Cryo-electron microscopy

  Bernal, R. A. (Contributor), Hafenstein, S. (Contributor), Olson, N. H. (Contributor), Bowman, V. D. (Contributor), Chipman, P. R. (Contributor), Baker, T. S. (Contributor), Fane, B. A. (Contributor) & Rossmann, M. G. (Contributor), RCSB-PDB, 2002

  DOI: 10.2210/pdb1m0f/pdb, https://www.rcsb.org/structure/1M0F

  Dataset

• 4JPP : Bacteriophage phiX174 H protein residues 143-282

  Fane, B. A. (Contributor), Sun, L. (Contributor), Young, L. N. (Contributor), Zhang, X. (Contributor), Boudko, S. P. (Contributor), Fokine, A. (Contributor) & Rossmann, M. G. (Contributor), RCSB-PDB, 2013

  DOI: 10.2210/pdb4jpp/pdb, https://www.rcsb.org/structure/4JPP

  Dataset

• 1TX9 : gpd prior to capsid assembly

  Morais, M. C. (Contributor), Fisher, M. (Contributor), Fane, B. A. (Contributor) & Rossmann, M. G. (Contributor), RCSB-PDB, 2005

  DOI: 10.2210/pdb1tx9/pdb, https://www.rcsb.org/structure/1TX9

  Dataset

• Additional file 5 of AtPIG-S, a predicted Glycosylphosphatidylinositol Transamidase subunit, is critical for pollen tube growth in Arabidopsis

  Desnoyer, N. (Creator), Howard, G. (Creator), Jong, E. (Creator) & Palanivelu, R. (Creator), figshare, 2020

  DOI: 10.6084/m9.figshare.12825341.v1, https://springernature.figshare.com/articles/Additional_file_5_of_AtPIG-S_a_predicted_Glycosylphosphatidylinositol_Transamidase_subunit_is_critical_for_pollen_tube_growth_in_Arabidopsis/12825341/1

  Dataset

• Additional file 5 of AtPIG-S, a predicted Glycosylphosphatidylinositol Transamidase subunit, is critical for pollen tube growth in Arabidopsis

  Desnoyer, N. (Creator), Howard, G. (Creator), Jong, E. (Creator) & Palanivelu, R. (Creator), figshare, 2020

  DOI: 10.6084/m9.figshare.12825341, https://springernature.figshare.com/articles/figure/Additional_file_5_of_AtPIG-S_a_predicted_Glycosylphosphatidylinositol_Transamidase_subunit_is_critical_for_pollen_tube_growth_in_Arabidopsis/12825341

  Dataset

• Additional file 4 of AtPIG-S, a predicted Glycosylphosphatidylinositol Transamidase subunit, is critical for pollen tube growth in Arabidopsis

  Desnoyer, N. (Creator), Howard, G. (Creator), Jong, E. (Creator) & Palanivelu, R. (Creator), figshare, 2020

  DOI: 10.6084/m9.figshare.12825338, https://springernature.figshare.com/articles/figure/Additional_file_4_of_AtPIG-S_a_predicted_Glycosylphosphatidylinositol_Transamidase_subunit_is_critical_for_pollen_tube_growth_in_Arabidopsis/12825338

  Dataset

• Additional file 6 of AtPIG-S, a predicted Glycosylphosphatidylinositol Transamidase subunit, is critical for pollen tube growth in Arabidopsis

  Desnoyer, N. (Creator), Howard, G. (Creator), Jong, E. (Creator) & Palanivelu, R. (Creator), figshare, 2020

  DOI: 10.6084/m9.figshare.12825344.v1, https://springernature.figshare.com/articles/Additional_file_6_of_AtPIG-S_a_predicted_Glycosylphosphatidylinositol_Transamidase_subunit_is_critical_for_pollen_tube_growth_in_Arabidopsis/12825344/1

  Dataset

• Additional file 8 of Extensive evaluation of ATAC-seq protocols for native or formaldehyde-fixed nuclei

  Zhang, H. (Creator), Rice, M. E. (Creator), Alvin, J. W. (Creator), Farrera-Gaffney, D. (Creator), Galligan, J. J. (Creator), Johnson, M. D. L. (Creator) & Cusanovich, D. A. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.19373307.v1, https://springernature.figshare.com/articles/dataset/Additional_file_8_of_Extensive_evaluation_of_ATAC-seq_protocols_for_native_or_formaldehyde-fixed_nuclei/19373307/1

  Dataset

• Additional file 1 of Extensive evaluation of ATAC-seq protocols for native or formaldehyde-fixed nuclei

  Zhang, H. (Creator), Rice, M. E. (Creator), Alvin, J. W. (Creator), Farrera-Gaffney, D. (Creator), Galligan, J. J. (Creator), Johnson, M. D. L. (Creator) & Cusanovich, D. A. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.19373283.v1, https://springernature.figshare.com/articles/dataset/Additional_file_1_of_Extensive_evaluation_of_ATAC-seq_protocols_for_native_or_formaldehyde-fixed_nuclei/19373283/1

  Dataset

• Additional file 3 of Extensive evaluation of ATAC-seq protocols for native or formaldehyde-fixed nuclei

  Zhang, H. (Creator), Rice, M. E. (Creator), Alvin, J. W. (Creator), Farrera-Gaffney, D. (Creator), Galligan, J. J. (Creator), Johnson, M. D. L. (Creator) & Cusanovich, D. A. (Creator), figshare, 2022

  DOI: 10.6084/m9.figshare.19373289.v1, https://springernature.figshare.com/articles/dataset/Additional_file_3_of_Extensive_evaluation_of_ATAC-seq_protocols_for_native_or_formaldehyde-fixed_nuclei/19373289/1

  Dataset

• Lateral root growth in Arabidopsis is controlled by short and long distance signaling through the LRR RLKs XIP1/CEPR1 and CEPR2

  Dimitrov, I. (Contributor) & Tax, F. E. (Contributor), Taylor & Francis, 2018

  DOI: 10.6084/m9.figshare.6804518.v1, https://tandf.figshare.com/articles/Lateral_root_growth_in_Arabidopsis_is_controlled_by_short_and_long_distance_signaling_through_the_LRR_RLKs_XIP1_CEPR1_and_CEPR2/6804518/1

  Dataset

• Additional file 2: of Characterization and functional biology of the soybean aleurone layer

  Schmidt, M. (Creator) & Herman, E. M. (Creator), figshare, 2018

  DOI: 10.6084/m9.figshare.7465805, https://figshare.com/articles/Additional_file_2_of_Characterization_and_functional_biology_of_the_soybean_aleurone_layer/7465805

  Dataset

• Additional file 3: of Characterization and functional biology of the soybean aleurone layer

  Schmidt, M. (Creator) & Herman, E. M. (Creator), figshare, 2018

  DOI: 10.6084/m9.figshare.7465814.v1, https://springernature.figshare.com/articles/Additional_file_3_of_Characterization_and_functional_biology_of_the_soybean_aleurone_layer/7465814/1

  Dataset

• Characterizing selective pressures on the pathway for de novo biosynthesis of pyrimidines in yeast

  Hermansen, R. A. (Creator), Mannakee, B. K. (Creator), Knecht, W. (Creator), Liberles, D. A. (Creator) & Gutenkunst, R. N. (Creator), figshare, 2015

  DOI: 10.6084/m9.figshare.c.3634724, https://figshare.com/collections/Characterizing_selective_pressures_on_the_pathway_for_de_novo_biosynthesis_of_pyrimidines_in_yeast/3634724

  Dataset

• The impact of genome-wide association studies on biomedical research publications

  Struck, T. J. (Creator), Mannakee, B. K. (Creator) & Gutenkunst, R. N. (Creator), figshare, 2018

  DOI: 10.6084/m9.figshare.c.4197353.v1, https://figshare.com/collections/The_impact_of_genome-wide_association_studies_on_biomedical_research_publications/4197353/1

  Dataset

• Additional file 3 of The impact of genome-wide association studies on biomedical research publications

  Struck, T. J. (Creator), Mannakee, B. K. (Creator) & Gutenkunst, R. N. (Creator), figshare, 2018

  DOI: 10.6084/m9.figshare.6963491, https://figshare.com/articles/Additional_file_3_of_The_impact_of_genome-wide_association_studies_on_biomedical_research_publications/6963491

  Dataset

• Embryo CHH hypermethylation is mediated by RdDM and is autonomously directed in Brassica rapa

  Chakraborty, T. (Creator), Kendall, T. (Creator), Grover, J. W. (Creator) & Harris, R. A. M. (Creator), figshare, 2021

  DOI: 10.6084/m9.figshare.c.5415228.v1, https://springernature.figshare.com/collections/Embryo_CHH_hypermethylation_is_mediated_by_RdDM_and_is_autonomously_directed_in_Brassica_rapa/5415228/1

  Dataset

• Insights into land plant evolution garnered from the Marchantia polymorpha genome, supplementary material

  Bowman, J. L. (Creator), Kohchi, T. (Contributor), Yamato, K. T. (Contributor), Jenkins, J. (Contributor), Shu, S. (Contributor), Ishizaki, K. (Contributor), Yamaoka, S. (Contributor), Nishihama, R. (Contributor), Nakamura, Y. (Contributor), Adam, C. (Contributor), Aki, S. S. (Contributor), Althoff, F. (Contributor), Araki, T. (Contributor), Arteaga-Vazquez, M. A. (Contributor), Balasubrmanian, S. (Contributor), Barry, K. (Contributor), Bauer, D. (Contributor), Boehm, C. R. (Contributor), Briginshaw, L. (Contributor), Catarino, B. (Contributor), Chen, F. (Contributor), Chiyoda, S. (Contributor), Chovatia, M. (Contributor), Davies, K. M. (Contributor), Delmans, M. (Contributor), Demura, T. (Contributor), Dierschke, T. (Contributor), Dolan, L. (Contributor), Dorantes-Acosta, A. E. (Contributor), Eklund, D. M. (Contributor), Florent, S. N. (Contributor), Flores-Sandoval, E. (Contributor), Fujiyama, A. (Contributor), Fukuzawa, H. (Contributor), Galik, B. (Contributor), Grimanelli, D. (Contributor), Grimwood, J. (Contributor), Grossniklaus, U. (Contributor), Hamada, T. (Contributor), Haseloff, J. (Contributor), Hetherington, A. J. (Contributor), Higo, A. (Contributor), Hirakawa, Y. (Contributor), Hundley, H. N. (Contributor), Ikeda, Y. (Contributor), Inoue, K. (Contributor), Inoue, S. (Contributor), Ishida, S. (Contributor), Jia, Q. (Contributor), Kakita, M. (Contributor), Kanazawa, T. (Contributor), Kawai, Y. (Contributor), Kennedy, M. (Contributor), Kinose, K. (Contributor), Kinoshita, T. (Contributor), Kohara, Y. (Contributor), Koide, E. (Contributor), Komatsu, K. (Contributor), Kubo, M. (Contributor), Kyozuka, J. (Contributor), Lagercrantz, U. (Contributor), Lin, S. (Contributor), Lindquist, E. (Contributor), Lipzen, A. M. (Contributor), Martienssen, R. A. (Contributor), Minamino, N. (Contributor), Mizutani, M. (Contributor), Mizutani, M. (Contributor), Mochizuki, N. (Contributor), Monte, I. (Contributor), Harris, R. A. M. (Contributor), Nagasaki, H. (Contributor), Nakagami, H. (Contributor), Naramoto, S. (Contributor), Nishitani, K. (Contributor), Ohtani, M. (Contributor), Okamoto, T. (Contributor), Okumura, M. (Contributor), Phillips, J. (Contributor), Pollak, B. (Contributor), Reinders, A. (Contributor), Rövekamp, M. (Contributor), Sano, R. (Contributor), Sawa, S. (Contributor), Shirakawa, M. (Contributor), Solano, R. (Contributor), Spunde, A. (Contributor), Suetsugu, N. (Contributor), Sugano, S. (Contributor), Sugiyama, A. (Contributor), Sun, R. (Contributor), Suzuki, Y. (Contributor), Takenaka, M. (Contributor), Takezawa, D. (Contributor), Tomogane, H. (Contributor), Tsuzuki, M. (Contributor), Ueda, T. (Contributor), Umeda, M. (Contributor), Ward, J. M. (Contributor), Watanabe, Y. (Contributor), Yazaki, K. (Contributor), Yokoyama, R. (Contributor), Yoshitake, Y. (Contributor), Yotsui, I. (Contributor), Zachgo, S. (Contributor) & Schmutz, J. (Contributor), Mendeley Data, 2017

  DOI: 10.17632/zb7hwyj3hp.1, https://data.mendeley.com/datasets/zb7hwyj3hp

  Dataset

• Supplementary Material for: A Phase II Exploratory Study of PXD-101 (Belinostat) Followed by Zevalin in Patients with Relapsed Aggressive High-Risk Lymphoma

  Puvvada, S. D. (Creator), Guillén-Rodríguez, J. M. (Creator), Rivera, X. I. (Creator), Heard, K. (Creator), Inclan, L. (Creator), Schmelz, M. (Creator), Schatz, J. H. (Creator) & Persky, D. O. (Creator), figshare, 2017

  DOI: 10.6084/m9.figshare.5373199, https://karger.figshare.com/articles/Supplementary_Material_for_A_Phase_II_Exploratory_Study_of_PXD-101_Belinostat_Followed_by_Zevalin_in_Patients_with_Relapsed_Aggressive_High-Risk_Lymphoma/5373199

  Dataset

• Appendix B. Study sites, hosts, and incidence of endophyte infection among 2-mm2 segments of photosynthetic tissues for 34 host species–site combinations.

  Arnold, A. E. (Contributor) & Lutzoni, F. (Contributor), Wiley, 2016

  DOI: 10.6084/m9.figshare.3527354.v1, https://wiley.figshare.com/articles/dataset/Appendix_B_Study_sites_hosts_and_incidence_of_endophyte_infection_among_2-mm2_segments_of_photosynthetic_tissues_for_34_host_species_site_combinations_/3527354/1

  Dataset