Transposable Element Prediction of of Twelve Platinum-Standard Reference Genomes Sequences

Yong Zhou (Creator)
Dmytro Chebotarov (Creator)
David A. Kudrna (Creator)
V. Llaca (Creator)
Seunghee Lee (Contributor)
Shanmugam Rajasekar (Creator)
Nahed Mohammed (Creator)
Noor Al-Bader (Creator)
Chandler Sobel-Sorenson (Creator)
Praveena Parakkal (Contributor)
Lady Johanna Arbelaez (Contributor)
Natalia Franco (Creator)
Nickolai Alexandrov (Contributor)
N. Ruaraidh Sackville Hamilton (Contributor)
H. Leung (Creator)
Ramil Mauleon (Creator)
Mathias Lorieux (Creator)
Andrea Zuccolo (Creator)
Kenneth L. McNally (Creator)
Jianwei Zhang (National Key Laboratory of Crop Genetic Improvement) (Contributor)
Rod A Wing (Creator)

Dataset

Description

The transposable element annotation of 12 new reference genomes was carried out using RepeatMasker and it was running using the library 'rice 7.0.0 liban'.

Date made available	2020
Publisher	figshare

DOI
10.6084/m9.figshare.11600535.v1

Access Dataset

Creative Commons Zero v1.0 Universal

1 Article

A platinum standard pan-genome resource that represents the population structure of Asian rice
Zhou, Y., Chebotarov, D., Kudrna, D., Llaca, V., Lee, S., Rajasekar, S., Mohammed, N., Al-Bader, N., Sobel-Sorenson, C., Parakkal, P., Arbelaez, L. J., Franco, N., Alexandrov, N., Hamilton, N. R. S., Leung, H., Mauleon, R., Lorieux, M., Zuccolo, A., McNally, K., Zhang, J., & 1 othersWing, R. A., Dec 1 2020, In: Scientific Data. 7, 1, 113.
Research output: Contribution to journal › Article › peer-review

Open Access
42 Scopus citations

Cite this

Zhou, Y. (Creator), Chebotarov, D. (Creator), Kudrna, D. (Creator), Llaca, V. (Creator), Lee, S. (Contributor), Rajasekar, S. (Creator), Mohammed, N. (Creator), Al-Bader, N. (Creator), Sobel-Sorenson, C. (Creator), Parakkal, P. (Contributor), Arbelaez, L. J. (Contributor), Franco, N. (Creator), Alexandrov, N. (Contributor), Hamilton, N. R. S. (Contributor), Leung, H. (Creator), Mauleon, R. (Creator), Lorieux, M. (Creator), Zuccolo, A. (Creator), McNally, K. (Creator), Zhang, J. (Contributor), Wing, R. A. (Creator) (2020). Transposable Element Prediction of of Twelve Platinum-Standard Reference Genomes Sequences. figshare. 10.6084/m9.figshare.11600535.v1

Transposable Element Prediction of of Twelve Platinum-Standard Reference Genomes Sequences

Description

DOI

Access Dataset

Research output

A platinum standard pan-genome resource that represents the population structure of Asian rice

Cite this