Genotype data for "Oryza glumaepatula: A wild relative to improve drought tolerance in cultivated rice"

This archive holds single nucleotide polymorphism (SNP) data derived from second-generation sequencing (NGS) of the Oryza glumaepatula panel described in the manuscript below. The SNPs were called against a new Oryza glumaepatula reference genome described in the manuscript (NCBI accession # ALNU03000000 ). The format is binary PLINK format (dataset consists of 3 files: bed,bim,fam files where bin is a SNP map, .fam is a sample information table, and .bed is a binary encoded genotype call matrix) Please refer to PLINK 1.9 documentation for conversion to other formats: https://www.cog-genomics.org/plink/ Two archives are uploaded here: the full 14M SNP dataset, and the subset used for GWAS analysis (785k SNPs)