ESS-DIVE reporting format for leaf-level gas exchange data and metadata

  • Kim Ely (Creator)
  • Alistair Rogers (Creator)
  • Robert Crystal-Ornelas (Creator)
  • Deborah A. Agarwal (Contributor)
  • Loren P. Albert (Contributor)
  • Ashehad A. Ali (Contributor)
  • Jeremiah Anderson (Contributor)
  • Michael J. Aspinwall (Contributor)
  • Chandra Bellasio (Contributor)
  • Carl J. Bernacchi (Contributor)
  • Steve Bonnage (Contributor)
  • Thomas N. Buckley (Contributor)
  • James Bunce (Contributor)
  • Angela C. Burnett (Contributor)
  • Florian A. Busch (Contributor)
  • Amanda Cavanagh (Contributor)
  • Lucas A. Cernusak (Contributor)
  • Joan Damerow (Contributor)
  • Kenneth J. Davidson (Contributor)
  • Martin G. De Kauwe (Contributor)
  • Michael C. Dietze (Contributor)
  • Tomas F. Domingues (Contributor)
  • Mirindi Eric Dusenge (Contributor)
  • D. S. Ellsworth (Contributor)
  • John Evans (Contributor)
  • Paul P.G. Gauthier (Contributor)
  • Bruno O. Gimenez (Contributor)
  • Elizabeth P. Gordon (Contributor)
  • Christopher M. Gough (Contributor)
  • Aud H. Halbritter (Contributor)
  • David T. Hanson (Contributor)
  • Mary A. Heskel (Contributor)
  • Jason R. Hupp (Contributor)
  • K. Jardine (Contributor)
  • J. Kattge (Contributor)
  • Trevor F. Keenan (Contributor)
  • Johannes Kromdijk (Contributor)
  • Dushan P. Kumarathunge (Contributor)
  • Julien Lamour (Contributor)
  • Andrew D B Leakey (Contributor)
  • David LeBauer (Contributor)
  • Qianyu Li (Contributor)
  • Marjorie R. Lundgren (Contributor)
  • Nathan G. McDowell (Contributor)
  • Katherine Meacham-Hensold (Contributor)
  • B. E. Medlyn (Contributor)
  • David Joseph Moore (Contributor)
  • Robinson I. Negrón Juárez (Contributor)
  • Ü Niinemets (Contributor)
  • C. P. Osborne (Contributor)
  • Alexandria L. Pivovaroff (Contributor)
  • Sasha C. Reed (Contributor)
  • Youngryel Ryu (Contributor)
  • Alvaro Sanz-Saez (Contributor)
  • Stephanie C. Schmiege (Contributor)
  • Shawn P. Serbin (Contributor)
  • Thomas D. Sharkey (Contributor)
  • Martijn Slot (Contributor)
  • Nicholas G. Smith (Contributor)
  • Daisy C. Souza (Contributor)
  • Joseph Ronald Stinziano (Contributor)
  • Ellen Stuart-Haëntjens (Contributor)
  • Samuel H. Taylor (Contributor)
  • Mauricio D. Tejera (Contributor)
  • Johan Uddling (Contributor)
  • Charuleka Varadharajan (Contributor)
  • Anthony P. Walker (Contributor)
  • Berkley J. Walker (Contributor)
  • Jeffrey M. Warren (Contributor)
  • Danielle A. Way (Contributor)
  • Brett T. Wolfe (Contributor)
  • Jin Wu (Contributor)
  • Stan D. Wullschleger (Contributor)
  • Chonggang Xu (Contributor)
  • Dedi Yang (Contributor)
  • Zhengbing Yan (Contributor)

Dataset

Description

Here we present documentation of the ESS-DIVE reporting format for leaf-level gas exchange data and metadata. This reporting format provides guidance to data contributors on how to store data to maximize their discoverability, facilitate their efficient reuse, and add value to individual datasets. For data users, the reporting format will better allow data repositories to optimize data search and extraction, and more readily integrate similar data into harmonized synthesis products. The reporting format specifies data table variable naming and unit conventions, as well as metadata characterizing experimental conditions and protocols. For common data types that were the focus of this initial version of the reporting format, i.e., survey measurements, dark respiration, carbon dioxide and light response curves, and parameters derived from those measurements, we took a further step of defining required additional data that would maximize the potential reuse of those data types. To aid data contributors and the development of data ingest tools by data repositories we provided a translation table comparing the outputs of common gas exchange instruments. The reporting format presented here is intended to form a foundation for future development that will incorporate additional data types and variables as gas exchange systems and measurement approaches advance in the future. The reporting format documentation is maintained and updated on the ESS-DIVE Community Space GitHub. This data package is the first published version of this reporting format, and comprises a zip file of the complete content of https://github.com/ess-dive-community/essdive-leaf-gas-exchange v1.0. The zip contains the reporting format description, guidelines, variable tables and instructions in GitHub markdown language (*.md) and 2 metadata templates as spreadsheets with drop down options (*.xlsx files, also function in GoogleSheets).

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