Additional file 2 of txci-ATAC-seq: a massive-scale single-cell technique to profile chromatin accessibility

  • Dominique O. Farrera (Creator)
  • Julie Ledford (Creator)
  • Ryan M. Mulqueen (Creator)
  • Natalie Iannuzo (Creator)
  • Darren A. Cusanovich (Creator)
  • Hao Zhang (Creator)
  • James J. Galligan (Creator)

Dataset

Description

Additional file 2: Table S1. Differentially accessible peaks identified between CC16-/- and WT samples for each cell type. This table is provided as a separate file. Column 1: Cell type in which the test was performed. Column 2: Peak region. Columns 3-5: Log2(fold-change), raw p-value, and FDR-adjusted p-value, respectively. Columns 6-11: Log2-transformed counts per million (CPM) for each sample, computed using the normalized library sizes. The CPM values for WT samples are shown in columns 6-8, and the CPM values for CC16-/- samples are shown in columns 9-11.
Date made available2024
Publisherfigshare

Cite this