Additional file 1 of Use of nCounter mRNA profiling to identify at-arrival gene expression patterns for predicting bovine respiratory disease in beef cattle

  • Matthew A. Scott (Creator)
  • Amelia R. Woolums (Creator)
  • Cyprianna Swiderski (Creator)
  • Alexis C. Thompson (Creator)
  • Andy D. Perkins (Creator)
  • Bindu Nanduri (Creator)
  • Brandi B. Karisch (Creator)
  • Dan R. Goehl (Creator)

Dataset

Description

Additional file 1: Table S1. Metadata of cattle selected for NanoString nCounter mRNA profiling. Table S2. Quality control information from sample preparation and RNA isolation. Table S3. mRNA probe selection information. Table S4. Differentially expressed genes identified between Healthy vs BRD cattle (fold change directionality in Healthy). Table S5. Differentially expressed genes identified between Treated_1 vs Healthy cattle (fold change directionality in Treated_1). Table S6. Differentially expressed genes identified between Treated_2+ vs Healthy cattle (fold change directionality in Treated_2+). Table S7. Differentially expressed genes identified between Treated_2+ vs Treated_1 cattle (fold change directionality in Treated_2+). Table S8. Levene’s test for homogeneity of variance across all 30 DEGs. Table S9. Selective multiclass receiver operator characteristic (ROC) curve analysis for each study population.
Date made available2022
Publisherfigshare

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